Information for 3-TGCACTCTGA (Motif 16)

A C G T A T C G T G A C G C T A G A T C G C A T A G T C C G A T A T C G T G C A
Reverse Opposite:
A C G T T A G C C G T A T C A G C G T A C T A G C G A T A C T G T A G C T G C A
p-value:1e-8
log p-value:-1.992e+01
Information Content per bp:1.681
Number of Target Sequences with motif55.0
Percentage of Target Sequences with motif12.39%
Number of Background Sequences with motif2497.5
Percentage of Background Sequences with motif5.13%
Average Position of motif in Targets51.3 +/- 25.5bp
Average Position of motif in Background49.4 +/- 30.2bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:1
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:TGCACTCTGA------
TGGACTTTGNNCTNTG
 A C G T A T C G T G A C G C T A G A T C G C A T A G T C C G A T A T C G T G C A A C G T A C G T A C G T A C G T A C G T A C G T
C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T C T A G T C G A G T A C G A T C G A C T A G T C C G A T C A T G

HNF4G/MA0484.1/Jaspar

Match Rank:2
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:TGCACTCTGA-----
TGGACTTTGNNCTCN
 A C G T A T C G T G A C G C T A G A T C G C A T A G T C C G A T A T C G T G C A A C G T A C G T A C G T A C G T A C G T
C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T T C A G T C A G G T C A G A T C G A C T A G T C G C A T

Hnf4a/MA0114.3/Jaspar

Match Rank:3
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--TGCACTCTGA----
ATTGGACTTTGACCCC
 A C G T A C G T A C G T A T C G T G A C G C T A G A T C G C A T A G T C C G A T A T C G T G C A A C G T A C G T A C G T A C G T
C T G A A G C T G A C T T C A G T C A G T G C A T G A C A G C T G A C T A G C T T C A G G T C A G T A C G A T C A G T C A G T C

NR2C2/MA0504.1/Jaspar

Match Rank:4
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:TGCACTCTGA-----
TGACCTCTGACCCCN
 A C G T A T C G T G A C G C T A G A T C G C A T A G T C C G A T A T C G T G C A A C G T A C G T A C G T A C G T A C G T
G A C T T C A G T G C A G T A C A G T C A G C T A G T C G A C T T A C G G T C A G T A C T G A C A G T C A G T C A C G T

TR4(NR),DR1/Hela-TR4-ChIP-Seq(GSE24685)/Homer

Match Rank:5
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:TGCACTCTGA----
TGACCTTTGACCTC
 A C G T A T C G T G A C G C T A G A T C G C A T A G T C C G A T A T C G T G C A A C G T A C G T A C G T A C G T
G A C T T A C G T G C A G T A C G A T C A G C T G A C T G A C T T A C G T G C A G T A C G A T C G A C T A G T C

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-TGCACTCTGA
CTGACCTTTG-
 A C G T A C G T A T C G T G A C G C T A G A T C G C A T A G T C C G A T A T C G T G C A
A T G C A C G T T A C G T G C A G T A C A G T C G A C T A G C T A C G T T C A G A C G T

IRF:BATF(IRF:bZIP)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer

Match Rank:7
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--TGCACTCTGA---
CTTTCANTATGACTV
 A C G T A C G T A C G T A T C G T G A C G C T A G A T C G C A T A G T C C G A T A T C G T G C A A C G T A C G T A C G T
A T G C G A C T A G C T A G C T A G T C G C T A C A G T C G A T G C T A A C G T A C T G G C T A T A G C G C A T T G A C

bZIP:IRF(bZIP,IRF)/Th17-BatF-ChIP-Seq(GSE39756)/Homer

Match Rank:8
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----TGCACTCTGA----
NAGTTTCABTHTGACTNW
 A C G T A C G T A C G T A C G T A C G T A T C G T G A C G C T A G A T C G C A T A G T C C G A T A T C G T G C A A C G T A C G T A C G T A C G T
A G T C C T G A A T C G A G C T A G C T G A C T A G T C G C T A A C G T C G A T G C A T C G A T A T C G C G T A T A G C G C A T A T G C C G T A

Pparg::Rxra/MA0065.2/Jaspar

Match Rank:9
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:TGCACTCTGA-----
TGACCTTTGCCCTAN
 A C G T A T C G T G A C G C T A G A T C G C A T A G T C C G A T A T C G T G C A A C G T A C G T A C G T A C G T A C G T
C G A T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G G T A C G A T C G A T C G A C T T C G A T A G C

PB0134.1_Hnf4a_2/Jaspar

Match Rank:10
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----TGCACTCTGA--
NNATTGGACTTTNGNN
 A C G T A C G T A C G T A C G T A C G T A T C G T G A C G C T A G A T C G C A T A G T C C G A T A T C G T G C A A C G T A C G T
C G A T C A G T G C T A C A G T G A C T C T A G C A T G G T C A G T A C A G C T G A C T G C A T C A G T C T A G T G A C T G A C