Information for 4-ACAGCCASBDCTSMCT (Motif 9)

T C G A T G A C T G C A C T A G T A G C G A T C C T G A A T G C A T G C C T A G G A T C G C A T A T C G T G A C G T A C C G A T
Reverse Opposite:
C G T A A C T G A C T G T A G C C G T A C T A G G A T C T A C G T A C G G A C T C T A G A T C G A G T C A C G T A C T G A C G T
p-value:1e-9
log p-value:-2.176e+01
Information Content per bp:1.545
Number of Target Sequences with motif28.0
Percentage of Target Sequences with motif5.69%
Number of Background Sequences with motif658.3
Percentage of Background Sequences with motif1.35%
Average Position of motif in Targets46.5 +/- 19.3bp
Average Position of motif in Background48.5 +/- 28.8bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer

Match Rank:1
Score:0.54
Offset:3
Orientation:forward strand
Alignment:ACAGCCASBDCTSMCT--
---GTCATGCHTGRCTGS
 T C G A T G A C T G C A C T A G T A G C G A T C C T G A A T G C A T G C C T A G G A T C G C A T A T C G T G A C G T A C C G A T A C G T A C G T
A C G T A C G T A C G T A C T G A G C T A G T C G T C A A G C T T C A G A T G C G A T C G C A T A T C G T C G A T A G C C G A T C A T G T A G C

ZNF165(Zf)/WHIM12-ZNF165-ChIP-Seq(GSE65937)/Homer

Match Rank:2
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:ACAGCCASBDCTSMCT-
--TGCCTGCGYCMCCTT
 T C G A T G A C T G C A C T A G T A G C G A T C C T G A A T G C A T G C C T A G G A T C G C A T A T C G T G A C G T A C C G A T A C G T
A C G T A C G T C A G T A C T G A G T C A G T C A C G T A C T G A T G C C T A G A G T C G A T C G T C A A G T C A G T C G C A T A C G T

EBNA1(EBV-virus)/Raji-EBNA1-ChIP-Seq(GSE30709)/Homer

Match Rank:3
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-ACAGCCASBDCTSMCT---
GGYAGCAYDTGCTDCCCNNN
 A C G T T C G A T G A C T G C A C T A G T A G C G A T C C T G A A T G C A T G C C T A G G A T C G C A T A T C G T G A C G T A C C G A T A C G T A C G T A C G T
A C T G C T A G G A T C C G T A C T A G A G T C T G C A G A C T C G T A A C G T T C A G A G T C A C G T C T G A A G T C A G T C G A T C C G T A T C A G T A C G

POL010.1_DCE_S_III/Jaspar

Match Rank:4
Score:0.52
Offset:1
Orientation:forward strand
Alignment:ACAGCCASBDCTSMCT
-CAGCC----------
 T C G A T G A C T G C A C T A G T A G C G A T C C T G A A T G C A T G C C T A G G A T C G C A T A T C G T G A C G T A C C G A T
A C G T T A G C C G T A A C T G A G T C A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:5
Score:0.49
Offset:1
Orientation:forward strand
Alignment:ACAGCCASBDCTSMCT
-AAACCACANN-----
 T C G A T G A C T G C A C T A G T A G C G A T C C T G A A T G C A T G C C T A G G A T C G C A T A T C G T G A C G T A C C G A T
A C G T G C T A C T G A T C G A A G T C A G T C C T G A A G T C G T C A C T G A T G C A A C G T A C G T A C G T A C G T A C G T

PB0151.1_Myf6_2/Jaspar

Match Rank:6
Score:0.49
Offset:-4
Orientation:forward strand
Alignment:----ACAGCCASBDCTSMCT
AGCAACAGCCGCACC-----
 A C G T A C G T A C G T A C G T T C G A T G A C T G C A C T A G T A G C G A T C C T G A A T G C A T G C C T A G G A T C G C A T A T C G T G A C G T A C C G A T
T C G A T A C G T G A C T C G A T G C A G A T C T C G A C T A G T G A C T A G C A T C G T A G C C T G A T G A C G A T C A C G T A C G T A C G T A C G T A C G T

Tcfcp2l1(CP2)/mES-Tcfcp2l1-ChIP-Seq(GSE11431)/Homer

Match Rank:7
Score:0.49
Offset:0
Orientation:forward strand
Alignment:ACAGCCASBDCTSMCT----
NAAACCGGTTNNAACCGGTT
 T C G A T G A C T G C A C T A G T A G C G A T C C T G A A T G C A T G C C T A G G A T C G C A T A T C G T G A C G T A C C G A T A C G T A C G T A C G T A C G T
T G A C T C G A C T G A C T G A A T G C G A T C C T A G T A C G G A C T G A C T G A T C T C G A C T G A C T G A A T G C G A T C C T A G A T C G G A C T G A C T

ELF3(ETS)/PDAC-ELF3-ChIP-Seq(GSE64557)/Homer

Match Rank:8
Score:0.49
Offset:9
Orientation:reverse strand
Alignment:ACAGCCASBDCTSMCT---
---------ACTTCCTGNT
 T C G A T G A C T G C A C T A G T A G C G A T C C T G A A T G C A T G C C T A G G A T C G C A T A T C G T G A C G T A C C G A T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A A G T C C G A T A C G T A G T C A G T C A C G T A T C G A C T G G C A T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:9
Score:0.48
Offset:0
Orientation:reverse strand
Alignment:ACAGCCASBDCTSMCT
BCAGACWA--------
 T C G A T G A C T G C A C T A G T A G C G A T C C T G A A T G C A T G C C T A G G A T C G C A T A T C G T G A C G T A C C G A T
A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer

Match Rank:10
Score:0.47
Offset:8
Orientation:reverse strand
Alignment:ACAGCCASBDCTSMCT--
--------CACTTCCTGT
 T C G A T G A C T G C A C T A G T A G C G A T C C T G A A T G C A T G C C T A G G A T C G C A T A T C G T G A C G T A C C G A T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C T C G A A G T C C G A T A C G T A G T C A G T C A C G T A T C G A G C T