p-value: | 1e-10 |
log p-value: | -2.435e+01 |
Information Content per bp: | 1.916 |
Number of Target Sequences with motif | 5.0 |
Percentage of Target Sequences with motif | 1.02% |
Number of Background Sequences with motif | 2.3 |
Percentage of Background Sequences with motif | 0.00% |
Average Position of motif in Targets | 50.4 +/- 13.5bp |
Average Position of motif in Background | 37.1 +/- 11.0bp |
Strand Bias (log2 ratio + to - strand density) | -0.6 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
Hoxb4(Homeobox)/ES-Hoxb4-ChIP-Seq(GSE34014)/Homer
Match Rank: | 1 |
Score: | 0.61 |
Offset: | 2 |
Orientation: | forward strand |
Alignment: | CCTGAGTGATGGCATT --TGATTRATGGCY-- |
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Hoxa9/MA0594.1/Jaspar
Match Rank: | 2 |
Score: | 0.61 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | CCTGAGTGATGGCATT --TGATTTATGGC--- |
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Pdx1(Homeobox)/Islet-Pdx1-ChIP-Seq(SRA008281)/Homer
Match Rank: | 3 |
Score: | 0.61 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | CCTGAGTGATGGCATT --TGATTGATGA---- |
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Nkx2-5(var.2)/MA0503.1/Jaspar
Match Rank: | 4 |
Score: | 0.57 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | CCTGAGTGATGGCATT CTTGAGTGGCT----- |
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HOXA2(Homeobox)/mES-Hoxa2-ChIP-Seq(Donaldson_et_al.)/Homer
Match Rank: | 5 |
Score: | 0.57 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | CCTGAGTGATGGCATT -ATGATKGATGRC--- |
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DUX4/MA0468.1/Jaspar
Match Rank: | 6 |
Score: | 0.57 |
Offset: | 6 |
Orientation: | reverse strand |
Alignment: | CCTGAGTGATGGCATT- ------TGATTAAATTA |
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Hoxc9(Homeobox)/Ainv15-Hoxc9-ChIP-Seq(GSE21812)/Homer
Match Rank: | 7 |
Score: | 0.56 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | CCTGAGTGATGGCATT --TGATTTATGGCC-- |
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PBX1/MA0070.1/Jaspar
Match Rank: | 8 |
Score: | 0.56 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | CCTGAGTGATGGCATT TTTGATTGATGN---- |
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PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer
Match Rank: | 9 |
Score: | 0.56 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | CCTGAGTGATGGCATT --TGAGTGACAGSC-- |
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Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer
Match Rank: | 10 |
Score: | 0.56 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | CCTGAGTGATGGCATT -NTGATTGACAGN--- |
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