Information for 3-TCRAGCTACACTA (Motif 3)

C G A T T A G C T C A G C G T A A C T G A G T C A C G T C G T A A G T C C G T A A G T C C G A T C G T A
Reverse Opposite:
A C G T C G T A A C T G A C G T A C T G A C G T C G T A A C T G A G T C A C G T A G C T A C T G C G T A
p-value:1e-12
log p-value:-2.780e+01
Information Content per bp:1.868
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif1.02%
Number of Background Sequences with motif0.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets31.4 +/- 27.3bp
Average Position of motif in Background88.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0051.1_Osr2_1/Jaspar

Match Rank:1
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:TCRAGCTACACTA---
CNNNGCTACTGTANNN
 C G A T T A G C T C A G C G T A A C T G A G T C A C G T C G T A A G T C C G T A A G T C C G A T C G T A A C G T A C G T A C G T
G A T C C G A T A C G T C G A T T C A G A G T C A G C T G C T A A G T C A G C T C A T G A C G T C G T A A G T C C G T A C G A T

PB0050.1_Osr1_1/Jaspar

Match Rank:2
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:TCRAGCTACACTA---
TNNTGCTACTGTNNNN
 C G A T T A G C T C A G C G T A A C T G A G T C A C G T C G T A A G T C C G T A A G T C C G A T C G T A A C G T A C G T A C G T
G A C T C G A T A C G T C G A T T C A G A G T C A G C T G C T A A G T C A G C T C T A G A C G T C G T A G C T A C G T A C G A T

DMRT3/MA0610.1/Jaspar

Match Rank:3
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:TCRAGCTACACTA
-NTTGATACATT-
 C G A T T A G C T C A G C G T A A C T G A G T C A C G T C G T A A G T C C G T A A G T C C G A T C G T A
A C G T C G T A C G A T A C G T A C T G G C T A A C G T C G T A A G T C C G T A C G A T A C G T A C G T

PB0154.1_Osr1_2/Jaspar

Match Rank:4
Score:0.54
Offset:0
Orientation:forward strand
Alignment:TCRAGCTACACTA---
ACATGCTACCTAATAC
 C G A T T A G C T C A G C G T A A C T G A G T C A C G T C G T A A G T C C G T A A G T C C G A T C G T A A C G T A C G T A C G T
C T G A G A T C G C T A G A C T T C A G G A T C A G C T C G T A G T A C G A T C G C A T T C G A G T C A C G A T G T C A T G A C

POL010.1_DCE_S_III/Jaspar

Match Rank:5
Score:0.53
Offset:2
Orientation:forward strand
Alignment:TCRAGCTACACTA
--CAGCC------
 C G A T T A G C T C A G C G T A A C T G A G T C A C G T C G T A A G T C C G T A A G T C C G A T C G T A
A C G T A C G T T A G C C G T A A C T G A G T C A T G C A C G T A C G T A C G T A C G T A C G T A C G T

PB0208.1_Zscan4_2/Jaspar

Match Rank:6
Score:0.53
Offset:1
Orientation:forward strand
Alignment:TCRAGCTACACTA----
-CGAAGCACACAAAATA
 C G A T T A G C T C A G C G T A A C T G A G T C A C G T C G T A A G T C C G T A A G T C C G A T C G T A A C G T A C G T A C G T A C G T
A C G T G T A C T A C G G C T A T C G A C T A G T G A C C G T A G T A C C T G A G A T C G C T A G T C A G T C A G C T A G C A T T C G A

Foxj3/MA0851.1/Jaspar

Match Rank:7
Score:0.52
Offset:0
Orientation:forward strand
Alignment:TCRAGCTACACTA----
AAAAAGTAAACAAACAC
 C G A T T A G C T C A G C G T A A C T G A G T C A C G T C G T A A G T C C G T A A G T C C G A T C G T A A C G T A C G T A C G T A C G T
G C T A C T G A G T C A C G T A C T G A T C A G G A C T G T C A G C T A C G T A A G T C C G T A G C T A G C T A T A G C T G A C G T A C

PB0017.1_Foxj3_1/Jaspar

Match Rank:8
Score:0.52
Offset:0
Orientation:forward strand
Alignment:TCRAGCTACACTA----
AAAAAGTAAACAAACAC
 C G A T T A G C T C A G C G T A A C T G A G T C A C G T C G T A A G T C C G T A A G T C C G A T C G T A A C G T A C G T A C G T A C G T
G C T A C T G A G T C A C G T A C T G A T C A G G A C T G T C A G C T A C G T A A G T C C G T A G C T A G C T A T A G C T G A C G T A C

PB0168.1_Sox14_2/Jaspar

Match Rank:9
Score:0.52
Offset:4
Orientation:forward strand
Alignment:TCRAGCTACACTA------
----CTCACACAATGGCGC
 C G A T T A G C T C A G C G T A A C T G A G T C A C G T C G T A A G T C C G T A A G T C C G A T C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A G T C A C G T A G T C T C G A T A G C C G T A A T G C G T C A G T C A G C A T C T A G T C A G G T A C A C T G A T G C

FOXF2/MA0030.1/Jaspar

Match Rank:10
Score:0.52
Offset:0
Orientation:forward strand
Alignment:TCRAGCTACACTA-
CAAACGTAAACAAT
 C G A T T A G C T C A G C G T A A C T G A G T C A C G T C G T A A G T C C G T A A G T C C G A T C G T A A C G T
A G T C G T C A G C T A C G T A T A G C C T A G A C G T C G T A C G T A C G T A A G T C C G T A G C T A C G A T