Information for 5-TGACTGACCT (Motif 16)

A C G T A C T G C G T A A G T C A C G T A C T G C G T A A G T C A G T C A C G T
Reverse Opposite:
C G T A A C T G A C T G A C G T A G T C C G T A A C T G A C G T A G T C C G T A
p-value:1e-3
log p-value:-8.522e+00
Information Content per bp:1.530
Number of Target Sequences with motif71.0
Percentage of Target Sequences with motif14.43%
Number of Background Sequences with motif4580.8
Percentage of Background Sequences with motif9.38%
Average Position of motif in Targets44.3 +/- 25.3bp
Average Position of motif in Background49.9 +/- 30.8bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.10
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:1
Score:0.74
Offset:4
Orientation:reverse strand
Alignment:TGACTGACCT--
----TGACCTYA
 A C G T A C T G C G T A A G T C A C G T A C T G C G T A A G T C A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A G C T C T A G G C T A T G A C A T G C A G C T A G T C C G T A

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:2
Score:0.74
Offset:4
Orientation:reverse strand
Alignment:TGACTGACCT
----TGACCT
 A C G T A C T G C G T A A G T C A C G T A C T G C G T A A G T C A G T C A C G T
A C G T A C G T A C G T A C G T A C G T C A T G G C T A G T A C G T A C G A C T

RORA/MA0071.1/Jaspar

Match Rank:3
Score:0.72
Offset:4
Orientation:reverse strand
Alignment:TGACTGACCT----
----TGACCTTGAT
 A C G T A C T G C G T A A G T C A C G T A C T G C G T A A G T C A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C T G C G T A A G T C A G T C A G C T G C A T A C T G C G T A G C A T

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:4
Score:0.71
Offset:4
Orientation:reverse strand
Alignment:TGACTGACCT--
----TGACCYCT
 A C G T A C T G C G T A A G T C A C G T A C T G C G T A A G T C A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A G C T T C A G T G C A G T A C T G A C A G C T A G T C A G C T

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.70
Offset:3
Orientation:reverse strand
Alignment:TGACTGACCT---
---CTGACCTTTG
 A C G T A C T G C G T A A G T C A C G T A C T G C G T A A G T C A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A T G C A C G T T A C G T G C A G T A C A G T C G A C T A G C T A C G T T C A G

NR4A2/MA0160.1/Jaspar

Match Rank:6
Score:0.70
Offset:3
Orientation:reverse strand
Alignment:TGACTGACCT-
---GTGACCTT
 A C G T A C T G C G T A A G T C A C G T A C T G C G T A A G T C A G T C A C G T A C G T
A C G T A C G T A C G T A C T G A C G T C T A G C G T A A G T C G T A C A G C T A G C T

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:7
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-TGACTGACCT-
BTGABTGACAGS
 A C G T A C G T A C T G C G T A A G T C A C G T A C T G C G T A A G T C A G T C A C G T A C G T
A C G T C G A T A C T G C G T A A C G T A C G T A C T G C T G A A G T C C T G A T A C G A T G C

SD0001.1_at_AC_acceptor/Jaspar

Match Rank:8
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:TGACTGACCT-
NNACTTACCTN
 A C G T A C T G C G T A A G T C A C G T A C T G C G T A A G T C A G T C A C G T A C G T
C T G A G A C T G C T A G A T C G C A T G A C T C G T A A G T C G A T C G C A T A C T G

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:9
Score:0.69
Offset:3
Orientation:forward strand
Alignment:TGACTGACCT---
---NTGACCTTGA
 A C G T A C T G C G T A A G T C A C G T A C T G C G T A A G T C A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C A T G A G C T T A C G G T C A G T A C T A G C A G C T G A C T A T C G T C G A

FOS::JUN/MA0099.2/Jaspar

Match Rank:10
Score:0.68
Offset:0
Orientation:forward strand
Alignment:TGACTGACCT
TGACTCA---
 A C G T A C T G C G T A A G T C A C G T A C T G C G T A A G T C A G T C A C G T
A G C T A C T G G T C A T G A C C G A T A T G C C G T A A C G T A C G T A C G T