Information for 7-CMGCTKGGACTKC (Motif 13)

A T G C G T C A T A C G A G T C A G C T A C T G A C T G T C A G G T C A A G T C G C A T A C G T A T G C
Reverse Opposite:
A T C G T G C A C G T A T A C G C A G T A G T C A G T C G T A C C T G A T C A G A T G C C A G T T A C G
p-value:1e-6
log p-value:-1.578e+01
Information Content per bp:1.632
Number of Target Sequences with motif31.0
Percentage of Target Sequences with motif6.30%
Number of Background Sequences with motif1040.3
Percentage of Background Sequences with motif2.13%
Average Position of motif in Targets51.3 +/- 20.8bp
Average Position of motif in Background50.5 +/- 29.3bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:1
Score:0.58
Offset:2
Orientation:forward strand
Alignment:CMGCTKGGACTKC
--CCAGGAACAG-
 A T G C G T C A T A C G A G T C A G C T A C T G A C T G T C A G G T C A A G T C G C A T A C G T A T G C
A C G T A C G T T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G A C G T

RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:2
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-CMGCTKGGACTKC
TGACCTTGACCT--
 A C G T A T G C G T C A T A C G A G T C A G C T A C T G A C T G T C A G G T C A A G T C G C A T A C G T A T G C
G A C T T A C G G C T A T G A C A G T C A G C T A C G T C T A G T C G A G T A C G T A C A G C T A C G T A C G T

Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer

Match Rank:3
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---CMGCTKGGACTKC
NAACAGCTGG------
 A C G T A C G T A C G T A T G C G T C A T A C G A G T C A G C T A C T G A C T G T C A G G T C A A G T C G C A T A C G T A T G C
C G A T T G C A T G C A G A T C C G T A A C T G T G A C G A C T C A T G A C T G A C G T A C G T A C G T A C G T A C G T A C G T

PB0134.1_Hnf4a_2/Jaspar

Match Rank:4
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:CMGCTKGGACTKC----
-NNATTGGACTTTNGNN
 A T G C G T C A T A C G A G T C A G C T A C T G A C T G T C A G G T C A A G T C G C A T A C G T A T G C A C G T A C G T A C G T A C G T
A C G T C G A T C A G T G C T A C A G T G A C T C T A G C A T G G T C A G T A C A G C T G A C T G C A T C A G T C T A G T G A C T G A C

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:5
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:CMGCTKGGACTKC
--GCTCGGSCTC-
 A T G C G T C A T A C G A G T C A G C T A C T G A C T G T C A G G T C A A G T C G C A T A C G T A T G C
A C G T A C G T C T A G G T A C A C G T A T G C C T A G A C T G T A C G A G T C A C G T A G T C A C G T

REST/MA0138.2/Jaspar

Match Rank:6
Score:0.53
Offset:-5
Orientation:forward strand
Alignment:-----CMGCTKGGACTKC---
TTCAGCACCATGGACAGCGCC
 A C G T A C G T A C G T A C G T A C G T A T G C G T C A T A C G A G T C A G C T A C T G A C T G T C A G G T C A A G T C G C A T A C G T A T G C A C G T A C G T A C G T
C A G T A G C T G A T C T C G A T A C G A T G C C G T A A T G C G A T C G C T A G A C T C T A G T C A G G T C A A T G C G C T A T C A G G T A C C A T G T A G C G A T C

REST-NRSF(Zf)/Jurkat-NRSF-ChIP-Seq/Homer

Match Rank:7
Score:0.53
Offset:-4
Orientation:reverse strand
Alignment:----CMGCTKGGACTKC---
TCAGCACCATGGACAGCTCC
 A C G T A C G T A C G T A C G T A T G C G T C A T A C G A G T C A G C T A C T G A C T G T C A G G T C A A G T C G C A T A C G T A T G C A C G T A C G T A C G T
A G C T G A T C C T G A T C A G T A G C C T G A A T G C G A T C G C T A G A C T C T A G C T A G G T C A A T G C C G T A T C A G G T A C C A G T T A G C G A T C

EBF1/MA0154.3/Jaspar

Match Rank:8
Score:0.52
Offset:-3
Orientation:forward strand
Alignment:---CMGCTKGGACTKC
ATTCCCAAGGGAAT--
 A C G T A C G T A C G T A T G C G T C A T A C G A G T C A G C T A C T G A C T G T C A G G T C A A G T C G C A T A C G T A T G C
C T G A A C G T G A C T A T G C A G T C A G T C G C T A C G T A T C A G T C A G C A T G C T G A G T C A G A C T A C G T A C G T

Zfx/MA0146.2/Jaspar

Match Rank:9
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--CMGCTKGGACTKC
GGGGCCGAGGCCTG-
 A C G T A C G T A T G C G T C A T A C G A G T C A G C T A C T G A C T G T C A G G T C A A G T C G C A T A C G T A T G C
A T C G A T C G T A C G C T A G A T G C G A T C A C T G T G C A T C A G A T C G A G T C A G T C A G C T T A C G A C G T

HEB(bHLH)/mES-Heb-ChIP-Seq(GSE53233)/Homer

Match Rank:10
Score:0.52
Offset:-3
Orientation:reverse strand
Alignment:---CMGCTKGGACTKC
NNVCAGCTGB------
 A C G T A C G T A C G T A T G C G T C A T A C G A G T C A G C T A C T G A C T G T C A G G T C A A G T C G C A T A C G T A T G C
C A T G T C A G T G A C G T A C G T C A T A C G T A G C G C A T T A C G A C T G A C G T A C G T A C G T A C G T A C G T A C G T