Information for 3-GAGGATCTAT (Motif 12)

A T C G C G T A A C T G A C T G C G T A A G C T A G T C A C G T C T G A A C G T
Reverse Opposite:
C G T A A G C T C G T A A C T G T C G A G C A T A G T C A G T C C G A T A T G C
p-value:1e-8
log p-value:-1.909e+01
Information Content per bp:1.861
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.63%
Number of Background Sequences with motif36.7
Percentage of Background Sequences with motif0.08%
Average Position of motif in Targets70.3 +/- 22.3bp
Average Position of motif in Background47.0 +/- 20.1bp
Strand Bias (log2 ratio + to - strand density)0.8
Multiplicity (# of sites on avg that occur together)1.38
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HNF6(Homeobox)/Liver-Hnf6-ChIP-Seq(ERP000394)/Homer

Match Rank:1
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:GAGGATCTAT--
--DGATCRATAN
 A T C G C G T A A C T G A C T G C G T A A G C T A G T C A C G T C T G A A C G T A C G T A C G T
A C G T A C G T C T A G C T A G C T G A A C G T A G T C C T A G C G T A A C G T G T C A G A T C

ZBTB12(Zf)/HEK293-ZBTB12.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-GAGGATCTAT----
BCNGGTTCTAGANCN
 A C G T A T C G C G T A A C T G A C T G C G T A A G C T A G T C A C G T C T G A A C G T A C G T A C G T A C G T A C G T
A G C T T G A C C T A G C A T G C T A G G A C T A C G T A G T C A G C T C T G A T A C G T C G A C G A T A G T C G A C T

PB0163.1_Six6_2/Jaspar

Match Rank:3
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--GAGGATCTAT-----
ANNNGGATATATCCNNN
 A C G T A C G T A T C G C G T A A C T G A C T G C G T A A G C T A G T C A C G T C T G A A C G T A C G T A C G T A C G T A C G T A C G T
G T C A C T A G C T A G A G T C T C A G C A T G T C G A A C G T T G C A A G C T C T G A A G C T T G A C A T G C T A G C G C T A A C G T

PB0144.1_Lef1_2/Jaspar

Match Rank:4
Score:0.58
Offset:0
Orientation:forward strand
Alignment:GAGGATCTAT------
GAAGATCAATCACTTA
 A T C G C G T A A C T G A C T G C G T A A G C T A G T C A C G T C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
T A C G C G T A T C G A T A C G G C T A C G A T A G T C C G T A C T G A C A G T G A T C C T G A G T A C A G C T G C A T C G T A

PB0090.1_Zbtb12_1/Jaspar

Match Rank:5
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--GAGGATCTAT-----
CTAAGGTTCTAGATCAC
 A C G T A C G T A T C G C G T A A C T G A C T G C G T A A G C T A G T C A C G T C T G A A C G T A C G T A C G T A C G T A C G T A C G T
A T G C A C G T G C T A T C G A A C T G C T A G C G A T C G A T A G T C A G C T T C G A C T A G T C G A G C A T A G T C T G C A A G T C

PB0188.1_Tcf7l2_2/Jaspar

Match Rank:6
Score:0.57
Offset:0
Orientation:forward strand
Alignment:GAGGATCTAT------
GAAGATCAATCACTAA
 A T C G C G T A A C T G A C T G C G T A A G C T A G T C A C G T C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
T A C G C T A G T C G A T A C G G C T A G C A T A G T C C G T A C T G A C A G T G A T C C T G A A T G C A C G T G C T A C G T A

ZNF415(Zf)/HEK293-ZNF415.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:7
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:GAGGATCTAT----
--GGCTCYAKCAYC
 A T C G C G T A A C T G A C T G C G T A A G C T A G T C A C G T C T G A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C A T G A C T G A G T C A C G T A G T C G A T C C G T A A C T G T A G C C T G A A G C T T A G C

PB0194.1_Zbtb12_2/Jaspar

Match Rank:8
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:GAGGATCTAT-----
AGNGTTCTAATGANN
 A T C G C G T A A C T G A C T G C G T A A G C T A G T C A C G T C T G A A C G T A C G T A C G T A C G T A C G T A C G T
G C T A T C A G T A G C C A T G C A G T C A G T G T A C A G C T G C T A G C T A A G C T T A C G C T G A A C G T C G T A

POL005.1_DPE/Jaspar

Match Rank:9
Score:0.54
Offset:0
Orientation:forward strand
Alignment:GAGGATCTAT
GAAGATGTT-
 A T C G C G T A A C T G A C T G C G T A A G C T A G T C A C G T C T G A A C G T
T C A G G T C A C T G A A T C G G C T A G A C T T A C G G A C T G A C T A C G T

PB0181.1_Spdef_2/Jaspar

Match Rank:10
Score:0.54
Offset:-4
Orientation:reverse strand
Alignment:----GAGGATCTAT--
CTACTAGGATGTNNTN
 A C G T A C G T A C G T A C G T A T C G C G T A A C T G A C T G C G T A A G C T A G T C A C G T C T G A A C G T A C G T A C G T
A G T C G C A T C G T A T G A C C G A T T C G A T A C G C A T G C G T A G A C T C T A G G A C T C G A T T C G A G C A T G A T C