Information for 5-TTKGMAWTSYYCYTGT (Motif 10)

A C G T C G A T A C G T A C T G G T C A C G T A C G T A A C G T A T C G A G C T G A C T A G T C A G C T A C G T A C T G A C G T
Reverse Opposite:
G T C A G T A C C G T A T C G A A C T G C T G A C T G A A T G C C G T A G C A T A C G T A C G T A G T C G T C A C G T A C G T A
p-value:1e-9
log p-value:-2.159e+01
Information Content per bp:1.820
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.81%
Number of Background Sequences with motif1.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets41.2 +/- 18.0bp
Average Position of motif in Background18.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

LIN54/MA0619.1/Jaspar

Match Rank:1
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-TTKGMAWTSYYCYTGT
ATTTGAATT--------
 A C G T A C G T C G A T A C G T A C T G G T C A C G T A C G T A A C G T A T C G A G C T G A C T A G T C A G C T A C G T A C T G A C G T
C G T A A C G T A C G T A G C T C T A G C G T A C G T A G A C T G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NFIA/MA0670.1/Jaspar

Match Rank:2
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--TTKGMAWTSYYCYTGT
NNTTGGCANN--------
 A C G T A C G T A C G T C G A T A C G T A C T G G T C A C G T A C G T A A C G T A T C G A G C T G A C T A G T C A G C T A C G T A C T G A C G T
G C T A A G T C A C G T A C G T A C T G A C T G A G T C C G T A G T A C A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:3
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:TTKGMAWTSYYCYTGT
TTTGAAACCG------
 A C G T C G A T A C G T A C T G G T C A C G T A C G T A A C G T A T C G A G C T G A C T A G T C A G C T A C G T A C T G A C G T
A C G T A C G T A C G T T A C G C G T A C T G A C G T A G T A C A G T C A T C G A C G T A C G T A C G T A C G T A C G T A C G T

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:4
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--TTKGMAWTSYYCYTGT
CCTTTGATGT--------
 A C G T A C G T A C G T C G A T A C G T A C T G G T C A C G T A C G T A A C G T A T C G A G C T G A C T A G T C A G C T A C G T A C T G A C G T
A T G C A G T C A C G T A C G T A C G T A T C G C G T A C G A T T A C G G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NFIC/MA0161.1/Jaspar

Match Rank:5
Score:0.51
Offset:0
Orientation:forward strand
Alignment:TTKGMAWTSYYCYTGT
TTGGCA----------
 A C G T C G A T A C G T A C T G G T C A C G T A C G T A A C G T A T C G A G C T G A C T A G T C A G C T A C G T A C T G A C G T
G A C T C A G T T C A G C T A G G T A C C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer

Match Rank:6
Score:0.51
Offset:-2
Orientation:reverse strand
Alignment:--TTKGMAWTSYYCYTGT
CCTTTGAWGT--------
 A C G T A C G T A C G T C G A T A C G T A C T G G T C A C G T A C G T A A C G T A T C G A G C T G A C T A G T C A G C T A C G T A C T G A C G T
A T G C A G T C A C G T A C G T A C G T A C T G C G T A C G T A A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Sox1/MA0870.1/Jaspar

Match Rank:7
Score:0.51
Offset:2
Orientation:reverse strand
Alignment:TTKGMAWTSYYCYTGT-
--AACAATGNTATTGTT
 A C G T C G A T A C G T A C T G G T C A C G T A C G T A A C G T A T C G A G C T G A C T A G T C A G C T A C G T A C T G A C G T A C G T
A C G T A C G T T C G A C T G A A G T C C T G A G T C A A C G T T A C G A G C T G C A T C G T A A C G T C A G T A C T G C G A T A C G T

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:8
Score:0.50
Offset:5
Orientation:reverse strand
Alignment:TTKGMAWTSYYCYTGT
-----BNTGDCCTTG-
 A C G T C G A T A C G T A C T G G T C A C G T A C G T A A C G T A T C G A G C T G A C T A G T C A G C T A C G T A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A T G C C A T G A C G T C T A G C T G A T G A C T G A C G A C T G C A T A C T G A C G T

Oct6(POU,Homeobox)/NPC-Pou3f1-ChIP-Seq(GSE35496)/Homer

Match Rank:9
Score:0.50
Offset:-4
Orientation:reverse strand
Alignment:----TTKGMAWTSYYCYTGT
CTCATTTGCATW--------
 A C G T A C G T A C G T A C G T A C G T C G A T A C G T A C T G G T C A C G T A C G T A A C G T A T C G A G C T G A C T A G T C A G C T A C G T A C T G A C G T
A G T C G C A T T G A C G T C A A C G T A G C T C G A T T C A G T G A C G C T A G C A T C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:10
Score:0.50
Offset:2
Orientation:forward strand
Alignment:TTKGMAWTSYYCYTGT
--GGAAATTCCC----
 A C G T C G A T A C G T A C T G G T C A C G T A C G T A A C G T A T C G A G C T G A C T A G T C A G C T A C G T A C T G A C G T
A C G T A C G T A C T G C A T G G C T A T C G A G C T A A G C T A G C T G T A C A G T C T G A C A C G T A C G T A C G T A C G T