Information for 4-GCACABCCATGTCCAC (Motif 4)

A C T G A T G C G T C A G T A C C G T A A G C T G A T C A G T C C T G A A C G T C A T G C A G T T A G C G T A C C G T A G T A C
Reverse Opposite:
A C T G A C G T A C T G A T C G G T C A G T A C T G C A A G C T A C T G C T A G T C G A A C G T A C T G A C G T A T C G A G T C
p-value:1e-12
log p-value:-2.779e+01
Information Content per bp:1.810
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif1.01%
Number of Background Sequences with motif2.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets50.8 +/- 15.5bp
Average Position of motif in Background78.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0104.1_Zscan4_1/Jaspar

Match Rank:1
Score:0.53
Offset:5
Orientation:forward strand
Alignment:GCACABCCATGTCCAC------
-----TACATGTGCACATAAAA
 A C T G A T G C G T C A G T A C C G T A A G C T G A T C A G T C C T G A A C G T C A T G C A G T T A G C G T A C C G T A G T A C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C A G T G T C A T G A C C T G A C G A T T C A G A G C T C T A G A G T C C T G A A G T C G C T A A G C T G C T A G C T A C G T A G T C A

EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer

Match Rank:2
Score:0.52
Offset:-2
Orientation:reverse strand
Alignment:--GCACABCCATGTCCAC
GGCCACACCCAN------
 A C G T A C G T A C T G A T G C G T C A G T A C C G T A A G C T G A T C A G T C C T G A A C G T C A T G C A G T T A G C G T A C C G T A G T A C
C T A G C T A G T G A C A G T C G T C A A G T C C T G A A G T C A G T C A G T C G C T A A C T G A C G T A C G T A C G T A C G T A C G T A C G T

PB0130.1_Gm397_2/Jaspar

Match Rank:3
Score:0.52
Offset:-4
Orientation:forward strand
Alignment:----GCACABCCATGTCCAC
AGCGGCACACACGCAA----
 A C G T A C G T A C G T A C G T A C T G A T G C G T C A G T A C C G T A A G C T G A T C A G T C C T G A A C G T C A T G C A G T T A G C G T A C C G T A G T A C
C T G A T C A G G T A C T C A G C T A G T G A C C T G A G A T C T C G A A T G C T G C A G T A C A C T G G A T C T G C A G T C A A C G T A C G T A C G T A C G T

Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer

Match Rank:4
Score:0.51
Offset:-1
Orientation:forward strand
Alignment:-GCACABCCATGTCCAC
GCCACACCCA-------
 A C G T A C T G A T G C G T C A G T A C C G T A A G C T G A T C A G T C C T G A A C G T C A T G C A G T T A G C G T A C C G T A G T A C
C T A G G T A C A G T C T G C A A G T C C T G A A G T C A G T C A G T C G C T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0026.1_Gm397_1/Jaspar

Match Rank:5
Score:0.50
Offset:5
Orientation:forward strand
Alignment:GCACABCCATGTCCAC------
-----CAGATGTGCACATACGT
 A C T G A T G C G T C A G T A C C G T A A G C T G A T C A G T C C T G A A C G T C A T G C A G T T A G C G T A C C G T A G T A C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G T A C G C T A C A T G C G T A C G A T T A C G A G C T C T A G A G T C C T G A A T G C G C T A A G C T G T C A G T A C C A T G G A C T

ZNF354C/MA0130.1/Jaspar

Match Rank:6
Score:0.50
Offset:10
Orientation:forward strand
Alignment:GCACABCCATGTCCAC
----------ATCCAC
 A C T G A T G C G T C A G T A C C G T A A G C T G A T C A G T C C T G A A C G T C A T G C A G T T A G C G T A C C G T A G T A C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G C A G C A T A G T C A G T C C G T A A T G C

SPDEF/MA0686.1/Jaspar

Match Rank:7
Score:0.50
Offset:1
Orientation:reverse strand
Alignment:GCACABCCATGTCCAC
-TACATCCGGGT----
 A C T G A T G C G T C A G T A C C G T A A G C T G A T C A G T C C T G A A C G T C A T G C A G T T A G C G T A C C G T A G T A C
A C G T G A C T C T G A A G T C C G T A G A C T G T A C A G T C A C T G A T C G A C T G G C A T A C G T A C G T A C G T A C G T

PB0044.1_Mtf1_1/Jaspar

Match Rank:8
Score:0.50
Offset:3
Orientation:forward strand
Alignment:GCACABCCATGTCCAC---
---GGGCCGTGTGCAAAAA
 A C T G A T G C G T C A G T A C C G T A A G C T G A T C A G T C C T G A A C G T C A T G C A G T T A G C G T A C C G T A G T A C A C G T A C G T A C G T
A C G T A C G T A C G T C A T G A C T G C T A G G A T C G T A C C A T G C A G T A C T G G A C T C A T G G T A C C G T A T G C A G T C A C T G A G C A T

Klf1/MA0493.1/Jaspar

Match Rank:9
Score:0.49
Offset:-2
Orientation:forward strand
Alignment:--GCACABCCATGTCCAC
GGCCACACCCA-------
 A C G T A C G T A C T G A T G C G T C A G T A C C G T A A G C T G A T C A G T C C T G A A C G T C A T G C A G T T A G C G T A C C G T A G T A C
C T A G T C A G T G A C G A T C G T C A A G T C C T G A A G T C A G T C A G T C G C T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:10
Score:0.48
Offset:-4
Orientation:forward strand
Alignment:----GCACABCCATGTCCAC
CCAGGAACAG----------
 A C G T A C G T A C G T A C G T A C T G A T G C G T C A G T A C C G T A A G C T G A T C A G T C C T G A A C G T C A T G C A G T T A G C G T A C C G T A G T A C
T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T