Information for 3-YCCAGAGAAATTGACC (Motif 3)

G A C T G T A C A G T C C G T A C T A G T C G A T A C G G T C A C T G A G T C A C A G T A G C T A T C G G T C A G A T C A G T C
Reverse Opposite:
C T A G C T A G C A G T T A G C T C G A G T C A C A G T A G C T C A G T A G T C A G C T G A T C C G A T C T A G C A T G C T G A
p-value:1e-12
log p-value:-2.855e+01
Information Content per bp:1.618
Number of Target Sequences with motif18.0
Percentage of Target Sequences with motif3.64%
Number of Background Sequences with motif170.1
Percentage of Background Sequences with motif0.35%
Average Position of motif in Targets35.9 +/- 25.3bp
Average Position of motif in Background48.8 +/- 25.2bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Stat6/MA0520.1/Jaspar

Match Rank:1
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----YCCAGAGAAATTGACC
CATTTCCTGAGAAAT-----
 A C G T A C G T A C G T A C G T G A C T G T A C A G T C C G T A C T A G T C G A T A C G G T C A C T G A G T C A C A G T A G C T A T C G G T C A G A T C A G T C
A T G C C G T A A G C T A C G T C G A T G T A C G A T C C G A T T A C G C T G A C A T G C G T A C T G A T G C A G A C T A C G T A C G T A C G T A C G T A C G T

STAT6(Stat)/Macrophage-Stat6-ChIP-Seq(GSE38377)/Homer

Match Rank:2
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-YCCAGAGAAATTGACC
TTCCKNAGAA-------
 A C G T G A C T G T A C A G T C C G T A C T A G T C G A T A C G G T C A C T G A G T C A C A G T A G C T A T C G G T C A G A T C A G T C
G A C T C A G T G A T C G A T C A C G T G A T C C T G A T A C G C G T A G T C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PAX5(Paired,Homeobox),condensed/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:YCCAGAGAAATTGACC
-TCAGNGAGCGTGAC-
 G A C T G T A C A G T C C G T A C T A G T C G A T A C G G T C A C T G A G T C A C A G T A G C T A T C G G T C A G A T C A G T C
A C G T A C G T T A G C T C G A A T C G T A C G T C A G C T G A A T C G A G T C C T A G G A C T C T A G C T G A T G A C A C G T

STAT6(Stat)/CD4-Stat6-ChIP-Seq(GSE22104)/Homer

Match Rank:4
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-YCCAGAGAAATTGACC
TTCTNNAGAANT-----
 A C G T G A C T G T A C A G T C C G T A C T A G T C G A T A C G G T C A C T G A G T C A C A G T A G C T A T C G G T C A G A T C A G T C
A C G T A C G T A G T C G A C T A G C T C T G A C T G A C T A G C G T A C G T A T C G A G A C T A C G T A C G T A C G T A C G T A C G T

STAT5(Stat)/mCD4+-Stat5-ChIP-Seq(GSE12346)/Homer

Match Rank:5
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-YCCAGAGAAATTGACC
TTTCTNAGAAAN-----
 A C G T G A C T G T A C A G T C C G T A C T A G T C G A T A C G G T C A C T G A G T C A C A G T A G C T A T C G G T C A G A T C A G T C
A G C T A C G T A C G T A G T C G A C T G C T A C T G A A C T G C G T A C G T A T G C A G A C T A C G T A C G T A C G T A C G T A C G T

PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:YCCAGAGAAATTGACC
GAAAGTGAAAGT----
 G A C T G T A C A G T C C G T A C T A G T C G A T A C G G T C A C T G A G T C A C A G T A G C T A T C G G T C A G A T C A G T C
T C A G C G T A T G C A C T G A C T A G C G A T C T A G G C T A T C G A C G T A A C T G A G C T A C G T A C G T A C G T A C G T

PB0030.1_Hnf4a_1/Jaspar

Match Rank:7
Score:0.54
Offset:6
Orientation:reverse strand
Alignment:YCCAGAGAAATTGACC-------
------NNANTTGACCCCTNNNN
 G A C T G T A C A G T C C G T A C T A G T C G A T A C G G T C A C T G A G T C A C A G T A G C T A T C G G T C A G A T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G T A C C G T A T C G A A C G T A C G T C T A G G T C A G T A C G T A C A G T C A G T C C A G T A C T G T C A G G T C A T A C G

PU.1(ETS)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:8
Score:0.53
Offset:3
Orientation:forward strand
Alignment:YCCAGAGAAATTGACC
---AGAGGAAGTG---
 G A C T G T A C A G T C C G T A C T A G T C G A T A C G G T C A C T G A G T C A C A G T A G C T A T C G G T C A G A T C A G T C
A C G T A C G T A C G T C G T A T A C G T C G A A C T G A C T G C G T A C G T A T A C G A G C T T A C G A C G T A C G T A C G T

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:9
Score:0.53
Offset:11
Orientation:reverse strand
Alignment:YCCAGAGAAATTGACC-
-----------TGACCT
 G A C T G T A C A G T C C G T A C T A G T C G A T A C G G T C A C T G A G T C A C A G T A G C T A T C G G T C A G A T C A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A T G G C T A G T A C G T A C G A C T

Stat5a::Stat5b/MA0519.1/Jaspar

Match Rank:10
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:YCCAGAGAAATTGACC
TTCTTGGAAAN-----
 G A C T G T A C A G T C C G T A C T A G T C G A T A C G G T C A C T G A G T C A C A G T A G C T A T C G G T C A G A T C A G T C
A G C T C G A T A G T C G A C T C A G T C T A G C T A G C T G A C G T A T C G A G A C T A C G T A C G T A C G T A C G T A C G T