Information for 3-GAACATGRAG (Motif 20)

A C T G G T C A C G T A A T G C G T C A A G C T A C T G C T A G C G T A C T A G
Reverse Opposite:
A G T C C G A T A G T C G T A C C T G A A C G T A T C G C G A T A C G T G T A C
p-value:1e-8
log p-value:-1.927e+01
Information Content per bp:1.804
Number of Target Sequences with motif18.0
Percentage of Target Sequences with motif3.64%
Number of Background Sequences with motif305.6
Percentage of Background Sequences with motif0.62%
Average Position of motif in Targets58.9 +/- 26.9bp
Average Position of motif in Background48.1 +/- 29.4bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:1
Score:0.69
Offset:1
Orientation:forward strand
Alignment:GAACATGRAG-
-AACAGGAAGT
 A C T G G T C A C G T A A T G C G T C A A G C T A C T G C T A G C G T A C T A G A C G T
A C G T T G C A C T G A A T G C G T C A A C T G A C T G C G T A C G T A C T A G A G C T

PH0085.1_Irx4/Jaspar

Match Rank:2
Score:0.65
Offset:-4
Orientation:reverse strand
Alignment:----GAACATGRAG---
NNTTTTACATGTANNNT
 A C G T A C G T A C G T A C G T A C T G G T C A C G T A A T G C G T C A A G C T A C T G C T A G C G T A C T A G A C G T A C G T A C G T
G C A T T A C G G C A T G C A T C A G T C G A T C G T A A G T C C G T A G C A T C T A G G C A T G C T A G A C T C G T A G C A T G C A T

PH0086.1_Irx5/Jaspar

Match Rank:3
Score:0.65
Offset:-4
Orientation:reverse strand
Alignment:----GAACATGRAG---
ANTNNTACATGTANNTN
 A C G T A C G T A C G T A C G T A C T G G T C A C G T A A T G C G T C A A G C T A C T G C T A G C G T A C T A G A C G T A C G T A C G T
G C T A G T C A G C A T G C A T C A G T C G A T G C T A A G T C C G T A G C A T T C A G C G A T G C T A C G A T G C T A G C A T G C A T

PH0084.1_Irx3_2/Jaspar

Match Rank:4
Score:0.64
Offset:-4
Orientation:reverse strand
Alignment:----GAACATGRAG---
NNTATTACATGTANNNT
 A C G T A C G T A C G T A C G T A C T G G T C A C G T A A T G C G T C A A G C T A C T G C T A G C G T A C T A G A C G T A C G T A C G T
G C A T C T G A G C A T G C T A A C G T C G A T C G T A G A T C C G T A G C A T C T A G C G A T G C T A C G A T G C T A G C A T G C A T

PH0083.1_Irx3_1/Jaspar

Match Rank:5
Score:0.64
Offset:-4
Orientation:reverse strand
Alignment:----GAACATGRAG---
ANTATTACATGTANNNN
 A C G T A C G T A C G T A C G T A C T G G T C A C G T A A T G C G T C A A G C T A C T G C T A G C G T A C T A G A C G T A C G T A C G T
G C T A C T A G G C A T G C T A A C G T C G A T C G T A A G T C C G T A G C A T T A C G C G A T G C T A A G C T G C A T G A C T G C A T

PH0082.1_Irx2/Jaspar

Match Rank:6
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---GAACATGRAG----
TAAATACATGTAAAATT
 A C G T A C G T A C G T A C T G G T C A C G T A A T G C G T C A A G C T A C T G C T A G C G T A C T A G A C G T A C G T A C G T A C G T
C G A T C G T A C G T A C T G A C G A T C G T A A G T C C G T A G C A T T A C G C G A T G C T A C G T A C T G A C G T A A C G T G C A T

ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer

Match Rank:7
Score:0.62
Offset:2
Orientation:forward strand
Alignment:GAACATGRAG--
--ACAGGAAGTG
 A C T G G T C A C G T A A T G C G T C A A G C T A C T G C T A G C G T A C T A G A C G T A C G T
A C G T A C G T T C G A T A G C G T C A A C T G A C T G C G T A C G T A C T A G A G C T T C A G

PH0087.1_Irx6/Jaspar

Match Rank:8
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----GAACATGRAG---
ANTTNTACATGTANTTN
 A C G T A C G T A C G T A C G T A C T G G T C A C G T A A T G C G T C A A G C T A C T G C T A G C G T A C T A G A C G T A C G T A C G T
G C T A C G A T C G A T G C A T A C G T C G A T C G T A A G T C C G T A G C A T C T A G C G A T G C T A G A C T C G A T C G A T C G A T

YY1/MA0095.2/Jaspar

Match Rank:9
Score:0.61
Offset:0
Orientation:forward strand
Alignment:GAACATGRAG--
CAAGATGGCGGC
 A C T G G T C A C G T A A T G C G T C A A G C T A C T G C T A G C G T A C T A G A C G T A C G T
T G A C C T G A T C G A T C A G C G T A A G C T C T A G C T A G G T A C A C T G T C A G G T A C

Myc/MA0147.2/Jaspar

Match Rank:10
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--GAACATGRAG
AAGCACATGG--
 A C G T A C G T A C T G G T C A C G T A A T G C G T C A A G C T A C T G C T A G C G T A C T A G
T C G A C T G A T A C G A G T C C G T A A G T C C T G A A C G T A C T G A C T G A C G T A C G T