Information for 8-AAAGTTCATGAACAGA (Motif 17)

C G T A C G T A C G T A C T A G A C G T A G C T A G T C C G T A A C G T A C T G C T G A C G T A A G T C C G T A C T A G C G T A
Reverse Opposite:
A C G T A G T C A C G T A C T G A C G T A G C T A G T C C G T A A C G T A C T G C T G A C G T A A G T C A C G T A C G T A C G T
p-value:1e-9
log p-value:-2.158e+01
Information Content per bp:1.910
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.81%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets54.8 +/- 34.6bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0134.1_Hnf4a_2/Jaspar

Match Rank:1
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----AAAGTTCATGAACAGA
GGCAAAAGTCCAATAA----
 A C G T A C G T A C G T A C G T C G T A C G T A C G T A C T A G A C G T A G C T A G T C C G T A A C G T A C T G C T G A C G T A A G T C C G T A C T A G C G T A
A C G T A C G T G A T C G T A C C G T A C T G A C T G A A C T G A C G T G T A C A G T C C T G A G T C A C G A T G T C A G C A T A C G T A C G T A C G T A C G T

Nr5a2/MA0505.1/Jaspar

Match Rank:2
Score:0.57
Offset:1
Orientation:forward strand
Alignment:AAAGTTCATGAACAGA
-AAGTTCAAGGTCAGC
 C G T A C G T A C G T A C T A G A C G T A G C T A G T C C G T A A C G T A C T G C T G A C G T A A G T C C G T A C T A G C G T A
A C G T T C G A C T G A C T A G A G C T G A C T T A G C G T C A C T G A C T A G A C T G G A C T A G T C C G T A A C T G A T G C

PH0087.1_Irx6/Jaspar

Match Rank:3
Score:0.56
Offset:0
Orientation:forward strand
Alignment:AAAGTTCATGAACAGA-
AAAATACATGTAAAAAT
 C G T A C G T A C G T A C T A G A C G T A G C T A G T C C G T A A C G T A C T G C T G A C G T A A G T C C G T A C T A G C G T A A C G T
G C T A G C T A G C T A C T G A C G A T C G T A A G T C C G T A G C A T C T A G C G A T G C T A G T C A C G T A C G T A G C T A C G A T

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:4
Score:0.56
Offset:5
Orientation:forward strand
Alignment:AAAGTTCATGAACAGA
-----CCAGGAACAG-
 C G T A C G T A C G T A C T A G A C G T A G C T A G T C C G T A A C G T A C T G C T G A C G T A A G T C C G T A C T A G C G T A
A C G T A C G T A C G T A C G T A C G T T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G A C G T

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:5
Score:0.56
Offset:-8
Orientation:forward strand
Alignment:--------AAAGTTCATGAACAGA
CANAGNNCAAAGTCCA--------
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A C G T A C T A G A C G T A G C T A G T C C G T A A C G T A C T G C T G A C G T A A G T C C G T A C T A G C G T A
G T A C G C T A T C A G C T G A C T A G C A T G A G C T G A T C T G C A T C G A C T G A A C T G C A G T A G T C G A T C G C T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

HSF2/MA0770.1/Jaspar

Match Rank:6
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-AAAGTTCATGAACAGA
GAANGTTCTAGAA----
 A C G T C G T A C G T A C G T A C T A G A C G T A G C T A G T C C G T A A C G T A C T G C T G A C G T A A G T C C G T A C T A G C G T A
T C A G C T G A G C T A G A T C T C A G G C A T C A G T G A T C A G C T T C G A A C T G G T C A G C T A A C G T A C G T A C G T A C G T

HSF1/MA0486.2/Jaspar

Match Rank:7
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-AAAGTTCATGAACAGA
GAACGTTCTAGAA----
 A C G T C G T A C G T A C G T A C T A G A C G T A G C T A G T C C G T A A C G T A C T G C T G A C G T A A G T C C G T A C T A G C G T A
C T A G G C T A C G T A A G T C T C A G C G A T C A G T A G T C A C G T T C G A A C T G G T C A G C T A A C G T A C G T A C G T A C G T

HNF4G/MA0484.1/Jaspar

Match Rank:8
Score:0.55
Offset:-7
Orientation:forward strand
Alignment:-------AAAGTTCATGAACAGA
AGAGTCCAAAGTCCA--------
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A C G T A C T A G A C G T A G C T A G T C C G T A A C G T A C T G C T G A C G T A A G T C C G T A C T A G C G T A
C G T A T C A G C T G A C T A G C A G T A G T C A G T C T G C A T C G A C T G A C A T G C A G T A G T C G A T C G C T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0146.1_Mafk_2/Jaspar

Match Rank:9
Score:0.55
Offset:-4
Orientation:forward strand
Alignment:----AAAGTTCATGAACAGA
GAAAAAATTGCAAGG-----
 A C G T A C G T A C G T A C G T C G T A C G T A C G T A C T A G A C G T A G C T A G T C C G T A A C G T A C T G C T G A C G T A A G T C C G T A C T A G C G T A
T C A G G T C A T C G A C T G A C T G A G C T A G C T A C A G T A G C T C A T G A G T C T G C A G T C A A T C G T C A G A C G T A C G T A C G T A C G T A C G T

PB0178.1_Sox8_2/Jaspar

Match Rank:10
Score:0.54
Offset:1
Orientation:forward strand
Alignment:AAAGTTCATGAACAGA
-ACATTCATGACACG-
 C G T A C G T A C G T A C T A G A C G T A G C T A G T C C G T A A C G T A C T G C T G A C G T A A G T C C G T A C T A G C G T A
A C G T C G T A G A T C G C T A A C G T C G A T G A T C T C G A A C G T C T A G G C T A G T A C G T C A A T G C T A C G A C G T