Information for 7-GGAACCTGCCTGG (Motif 16)

A C T G A T C G C G T A G T C A A G T C A G T C A C G T A C T G A G T C A G T C C G A T A C T G A C T G
Reverse Opposite:
A G T C A G T C C G T A A C T G A C T G G T A C C G T A A C T G A C T G A C G T A C G T A T G C G T A C
p-value:1e-9
log p-value:-2.158e+01
Information Content per bp:1.889
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.81%
Number of Background Sequences with motif1.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets44.6 +/- 24.8bp
Average Position of motif in Background31.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.25
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:1
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:GGAACCTGCCTGG
-NNACTTGCCTT-
 A C T G A T C G C G T A G T C A A G T C A G T C A C G T A C T G A G T C A G T C C G A T A C T G A C T G
A C G T T C G A G A T C T G C A A G T C G A C T A G C T A C T G A G T C G A T C G C A T A C G T A C G T

SNAI2/MA0745.1/Jaspar

Match Rank:2
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:GGAACCTGCCTGG
-NCACCTGTN---
 A C T G A T C G C G T A G T C A A G T C A G T C A C G T A C T G A G T C A G T C C G A T A C T G A C T G
A C G T T C G A G T A C C T G A G A T C G A T C C G A T C A T G G A C T G A C T A C G T A C G T A C G T

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:3
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-GGAACCTGCCTGG
SNGCACCTGCHS--
 A C G T A C T G A T C G C G T A G T C A A G T C A G T C A C G T A C T G A G T C A G T C C G A T A C T G A C T G
T A C G C T A G T A C G A G T C C G T A A G T C A G T C A C G T A C T G A G T C G A T C T A G C A C G T A C G T

TEAD2(TEA)/Py2T-Tead2-ChIP-Seq(GSE55709)/Homer

Match Rank:4
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:GGAACCTGCCTGG
---RCATTCCWGG
 A C T G A T C G C G T A G T C A A G T C A G T C A C G T A C T G A G T C A G T C C G A T A C T G A C T G
A C G T A C G T A C G T C T G A T G A C C T G A A C G T C G A T A G T C A G T C G C T A C T A G T A C G

p53(p53)/mES-cMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:5
Score:0.58
Offset:3
Orientation:forward strand
Alignment:GGAACCTGCCTGG----
---ACATGCCCGGGCAT
 A C T G A T C G C G T A G T C A A G T C A G T C A C G T A C T G A G T C A G T C C G A T A C T G A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C T G A T A G C G C T A C G A T A T C G A G T C G A T C G A T C C T A G T C A G T C A G G T A C G C T A C A G T

Stat3(Stat)/mES-Stat3-ChIP-Seq(GSE11431)/Homer

Match Rank:6
Score:0.57
Offset:5
Orientation:forward strand
Alignment:GGAACCTGCCTGG--
-----CTTCCNGGAA
 A C T G A T C G C G T A G T C A A G T C A G T C A C G T A C T G A G T C A G T C C G A T A C T G A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A G T C G A C T C A G T G T A C A G T C A T C G T C A G A C T G G T C A C G T A

Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:7
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--GGAACCTGCCTGG
TGGCAGNCTGCCAG-
 A C G T A C G T A C T G A T C G C G T A G T C A A G T C A G T C A C G T A C T G A G T C A G T C C G A T A C T G A C T G
C A G T A C T G A T C G T G A C G C T A A C T G T A G C G T A C C G A T A C T G T A G C G T A C G C T A T C A G A C G T

HRE(HSF)/HepG2-HSF1-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----GGAACCTGCCTGG---
TTCTAGAANNTTCCAGAANN
 A C G T A C G T A C G T A C G T A C T G A T C G C G T A G T C A A G T C A G T C A C G T A C T G A G T C A G T C C G A T A C T G A C T G A C G T A C G T A C G T
A C G T A C G T T A G C A G C T T C G A C T A G G T C A C T G A A T C G T A G C G A C T C A G T A T G C A G T C C T G A A C T G T C G A T C G A A T C G T A C G

HES7/MA0822.1/Jaspar

Match Rank:9
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-GGAACCTGCCTGG
TGGCACGTGCCA--
 A C G T A C T G A T C G C G T A G T C A A G T C A G T C A C G T A C T G A G T C A G T C C G A T A C T G A C T G
G A C T T C A G T C A G G A T C T C G A A G T C C T A G G A C T T C A G G A T C A G T C C T G A A C G T A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:10
Score:0.55
Offset:5
Orientation:forward strand
Alignment:GGAACCTGCCTGG
-----CTGTCTGG
 A C T G A T C G C G T A G T C A A G T C A G T C A C G T A C T G A G T C A G T C C G A T A C T G A C T G
A C G T A C G T A C G T A C G T A C G T A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G