Information for 5-GAGGTGGGTVADG (Motif 12)

A C T G C G T A A C T G A C T G A C G T A C T G C T A G A C T G A C G T T C G A C T G A C A T G A C T G
Reverse Opposite:
A G T C G A T C A G C T A G C T G T C A A G T C A G T C A G T C C G T A A G T C A G T C A C G T G T A C
p-value:1e-10
log p-value:-2.434e+01
Information Content per bp:1.853
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif1.01%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets65.2 +/- 15.9bp
Average Position of motif in Background51.7 +/- 20.2bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SD0001.1_at_AC_acceptor/Jaspar

Match Rank:1
Score:0.67
Offset:0
Orientation:forward strand
Alignment:GAGGTGGGTVADG
CAGGTAAGTAT--
 A C T G C G T A A C T G A C T G A C G T A C T G C T A G A C T G A C G T T C G A C T G A C A T G A C T G
T G A C C G T A C T A G A C T G A C G T C T G A C G T A C T A G C G A T C T G A G A C T A C G T A C G T

ZEB1/MA0103.2/Jaspar

Match Rank:2
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:GAGGTGGGTVADG
CAGGTGAGG----
 A C T G C G T A A C T G A C T G A C G T A C T G C T A G A C T G A C G T T C G A C T G A C A T G A C T G
A G T C C G T A A C T G A C T G A C G T C T A G G C T A C T A G A C T G A C G T A C G T A C G T A C G T

PB0157.1_Rara_2/Jaspar

Match Rank:3
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-GAGGTGGGTVADG--
AGAGCGGGGTCAAGTA
 A C G T A C T G C G T A A C T G A C T G A C G T A C T G C T A G A C T G A C G T T C G A C T G A C A T G A C T G A C G T A C G T
G T C A C A T G G T C A C A T G A G T C A T C G T A C G A C T G C A T G C G A T A G T C C T G A G T C A A C T G A C G T G T C A

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:4
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--GAGGTGGGTVADG
NNCAGGTGNN-----
 A C G T A C G T A C T G C G T A A C T G A C T G A C G T A C T G C T A G A C T G A C G T T C G A C T G A C A T G A C T G
C A G T T A C G A G T C C G T A A C T G A C T G A C G T A C T G A C G T T A C G A C G T A C G T A C G T A C G T A C G T

TBX5/MA0807.1/Jaspar

Match Rank:5
Score:0.60
Offset:1
Orientation:forward strand
Alignment:GAGGTGGGTVADG
-AGGTGTGA----
 A C T G C G T A A C T G A C T G A C G T A C T G C T A G A C T G A C G T T C G A C T G A C A T G A C T G
A C G T C T G A T C A G A C T G A C G T C T A G A G C T A C T G C T G A A C G T A C G T A C G T A C G T

TBX15/MA0803.1/Jaspar

Match Rank:6
Score:0.60
Offset:1
Orientation:forward strand
Alignment:GAGGTGGGTVADG
-AGGTGTGA----
 A C T G C G T A A C T G A C T G A C G T A C T G C T A G A C T G A C G T T C G A C T G A C A T G A C T G
A C G T C T G A C T A G T C A G A C G T A T C G A G C T A C T G C T G A A C G T A C G T A C G T A C G T

FOSL1/MA0477.1/Jaspar

Match Rank:7
Score:0.58
Offset:2
Orientation:forward strand
Alignment:GAGGTGGGTVADG
--GGTGACTCATG
 A C T G C G T A A C T G A C T G A C G T A C T G C T A G A C T G A C G T T C G A C T G A C A T G A C T G
A C G T A C G T C T A G T C A G A C G T A C T G C G T A T A G C A C G T G T A C C G T A A C G T T A C G

TBR1/MA0802.1/Jaspar

Match Rank:8
Score:0.58
Offset:1
Orientation:forward strand
Alignment:GAGGTGGGTVADG
-AGGTGTGAAA--
 A C T G C G T A A C T G A C T G A C G T A C T G C T A G A C T G A C G T T C G A C T G A C A T G A C T G
A C G T C T G A C T A G A T C G A G C T A T C G G A C T A C T G C T G A G C T A G C T A A C G T A C G T

GLIS2/MA0736.1/Jaspar

Match Rank:9
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----GAGGTGGGTVADG
CTTCGCGGGGGGTC---
 A C G T A C G T A C G T A C G T A C T G C G T A A C T G A C T G A C G T A C T G C T A G A C T G A C G T T C G A C T G A C A T G A C T G
T A G C C A G T G A C T G A T C T C A G G A T C C T A G C A T G A C T G C T A G C A T G C T A G A G C T T G A C A C G T A C G T A C G T

TCF4/MA0830.1/Jaspar

Match Rank:10
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--GAGGTGGGTVADG
NNCAGGTGCG-----
 A C G T A C G T A C T G C G T A A C T G A C T G A C G T A C T G C T A G A C T G A C G T T C G A C T G A C A T G A C T G
G C T A T A C G G A T C C G T A A T C G T A C G A C G T C T A G A G T C C T A G A C G T A C G T A C G T A C G T A C G T