Information for 2-CGGAAACAAA (Motif 5)

A T G C A C T G C T A G C T G A C G T A C T G A G T A C C G T A T C G A C T G A
Reverse Opposite:
A G C T A C G T A C G T A C T G A G C T C G A T A G C T A G T C G T A C A T C G
p-value:1e-11
log p-value:-2.671e+01
Information Content per bp:1.846
Number of Target Sequences with motif15.0
Percentage of Target Sequences with motif1.77%
Number of Background Sequences with motif66.9
Percentage of Background Sequences with motif0.14%
Average Position of motif in Targets48.5 +/- 19.5bp
Average Position of motif in Background47.4 +/- 29.7bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0016.1_Foxj1_1/Jaspar

Match Rank:1
Score:0.72
Offset:-2
Orientation:forward strand
Alignment:--CGGAAACAAA----
AAAGTAAACAAAAATT
 A C G T A C G T A T G C A C T G C T A G C T G A C G T A C T G A G T A C C G T A T C G A C T G A A C G T A C G T A C G T A C G T
G C T A C G A T G C T A C T A G G A C T G T C A G C T A C G T A G A T C C G T A G T C A C G T A G T C A C G T A C A G T C A G T

Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan_et_al.)/Homer

Match Rank:2
Score:0.72
Offset:1
Orientation:reverse strand
Alignment:CGGAAACAAA
-GTAAACAG-
 A T G C A C T G C T A G C T G A C G T A C T G A G T A C C G T A T C G A C T G A
A C G T C T A G C A G T G T C A C G T A C T G A A G T C C G T A T A C G A C G T

Elk4(ETS)/Hela-Elk4-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.72
Offset:-2
Orientation:reverse strand
Alignment:--CGGAAACAAA
RCCGGAARYN--
 A C G T A C G T A T G C A C T G C T A G C T G A C G T A C T G A G T A C C G T A T C G A C T G A
T C G A T A G C T G A C C T A G C A T G G C T A G C T A T C A G G A C T C T A G A C G T A C G T

FOXO3/MA0157.2/Jaspar

Match Rank:4
Score:0.71
Offset:1
Orientation:forward strand
Alignment:CGGAAACAAA
-GTAAACAA-
 A T G C A C T G C T A G C T G A C G T A C T G A G T A C C G T A T C G A C T G A
A C G T C T A G A C G T T G C A G T C A G T C A G T A C G T C A C G T A A C G T

FOXP1/MA0481.1/Jaspar

Match Rank:5
Score:0.71
Offset:-4
Orientation:forward strand
Alignment:----CGGAAACAAA-
CAAAAGTAAACAAAG
 A C G T A C G T A C G T A C G T A T G C A C T G C T A G C T G A C G T A C T G A G T A C C G T A T C G A C T G A A C G T
G T A C G C T A C G T A T C G A C T G A T C A G G C A T C G T A C G T A C G T A T G A C C G T A T G C A C G T A T C A G

FOXF2/MA0030.1/Jaspar

Match Rank:6
Score:0.71
Offset:-4
Orientation:forward strand
Alignment:----CGGAAACAAA
CAAACGTAAACAAT
 A C G T A C G T A C G T A C G T A T G C A C T G C T A G C T G A C G T A C T G A G T A C C G T A T C G A C T G A
A G T C G T C A G C T A C G T A T A G C C T A G A C G T C G T A C G T A C G T A A G T C C G T A G C T A C G A T

Sox3/MA0514.1/Jaspar

Match Rank:7
Score:0.70
Offset:2
Orientation:reverse strand
Alignment:CGGAAACAAA--
--AAAACAAAGG
 A T G C A C T G C T A G C T G A C G T A C T G A G T A C C G T A T C G A C T G A A C G T A C G T
A C G T A C G T T C G A T C G A T C G A C G T A A T G C C G T A C G T A C G T A C T A G T A C G

Fli1(ETS)/CD8-FLI-ChIP-Seq(GSE20898)/Homer

Match Rank:8
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--CGGAAACAAA
DCCGGAARYN--
 A C G T A C G T A T G C A C T G C T A G C T G A C G T A C T G A G T A C C G T A T C G A C T G A
C T G A T A G C T G A C T A C G C T A G G T C A G C T A T C A G G A C T T C A G A C G T A C G T

Foxj3/MA0851.1/Jaspar

Match Rank:9
Score:0.69
Offset:-4
Orientation:forward strand
Alignment:----CGGAAACAAA---
AAAAAGTAAACAAACAC
 A C G T A C G T A C G T A C G T A T G C A C T G C T A G C T G A C G T A C T G A G T A C C G T A T C G A C T G A A C G T A C G T A C G T
G C T A C T G A G T C A C G T A C T G A T C A G G A C T G T C A G C T A C G T A A G T C C G T A G C T A G C T A T A G C T G A C G T A C

PB0017.1_Foxj3_1/Jaspar

Match Rank:10
Score:0.69
Offset:-4
Orientation:forward strand
Alignment:----CGGAAACAAA---
AAAAAGTAAACAAACAC
 A C G T A C G T A C G T A C G T A T G C A C T G C T A G C T G A C G T A C T G A G T A C C G T A T C G A C T G A A C G T A C G T A C G T
G C T A C T G A G T C A C G T A C T G A T C A G G A C T G T C A G C T A C G T A A G T C C G T A G C T A G C T A T A G C T G A C G T A C