Information for 5-CGCTTGTCTGTGG (Motif 12)

A G T C A C T G A T G C A C G T C G A T A C T G A C G T A G T C A C G T A C T G A C G T A C T G A C T G
Reverse Opposite:
A G T C A G T C C G T A A G T C C G T A A C T G G T C A A G T C C G T A C G T A A T C G A G T C A C T G
p-value:1e-7
log p-value:-1.664e+01
Information Content per bp:1.924
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.48%
Number of Background Sequences with motif2.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets56.0 +/- 11.6bp
Average Position of motif in Background74.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX1/MA0002.2/Jaspar

Match Rank:1
Score:0.67
Offset:5
Orientation:forward strand
Alignment:CGCTTGTCTGTGG---
-----GTCTGTGGTTT
 A G T C A C T G A T G C A C G T C G A T A C T G A C G T A G T C A C G T A C T G A C G T A C T G A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C T G A G C T A G T C C G A T A T C G G A C T A C T G A C T G A G C T G A C T C G A T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:2
Score:0.65
Offset:5
Orientation:reverse strand
Alignment:CGCTTGTCTGTGG----
-----NNHTGTGGTTWN
 A G T C A C T G A T G C A C G T C G A T A C T G A C G T A G T C A C G T A C T G A C G T A C T G A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C A T G C G A T G A C T A C G T A C T G A C G T A C T G A C T G A C G T A G C T C G A T A C T G

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:3
Score:0.63
Offset:3
Orientation:forward strand
Alignment:CGCTTGTCTGTGG
---TWGTCTGV--
 A G T C A C T G A T G C A C G T C G A T A C T G A C G T A G T C A C G T A C T G A C G T A C T G A C T G
A C G T A C G T A C G T A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G A C G T A C G T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:4
Score:0.63
Offset:6
Orientation:forward strand
Alignment:CGCTTGTCTGTGG---
------GCTGTGGTTT
 A G T C A C T G A T G C A C G T C G A T A C T G A C G T A G T C A C G T A C T G A C G T A C T G A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C T G G A T C G A C T A C T G A C G T C A T G A C T G A C G T A G C T C G A T

Zfp809(Zf)/ES-Zfp809-ChIP-Seq(GSE70799)/Homer

Match Rank:5
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--CGCTTGTCTGTGG
GGGGCTYGKCTGGGA
 A C G T A C G T A G T C A C T G A T G C A C G T C G A T A C T G A C G T A G T C A C G T A C T G A C G T A C T G A C T G
C T A G C A T G C A T G T A C G A G T C G C A T A G C T C T A G A C G T A G T C G A C T A C T G A C T G A C T G T C G A

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:6
Score:0.60
Offset:7
Orientation:reverse strand
Alignment:CGCTTGTCTGTGG----
-------CTGTGGTTTN
 A G T C A C T G A T G C A C G T C G A T A C T G A C G T A G T C A C G T A C T G A C G T A C T G A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A T C A C G T A C T G A G C T A C T G A C T G A G C T A G C T C G A T A T C G

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:7
Score:0.59
Offset:1
Orientation:forward strand
Alignment:CGCTTGTCTGTGG
-VBSYGTCTGG--
 A G T C A C T G A T G C A C G T C G A T A C T G A C G T A G T C A C G T A C T G A C G T A C T G A C T G
A C G T T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G A C G T A C G T

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:8
Score:0.59
Offset:6
Orientation:reverse strand
Alignment:CGCTTGTCTGTGG---
------NNTGTGGTTT
 A G T C A C T G A T G C A C G T C G A T A C T G A C G T A G T C A C G T A C T G A C G T A C T G A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T C A G T A C T G G A C T A C T G A C T G A G C T A G C T C G A T

POL009.1_DCE_S_II/Jaspar

Match Rank:9
Score:0.58
Offset:6
Orientation:forward strand
Alignment:CGCTTGTCTGTGG
------GCTGTG-
 A G T C A C T G A T G C A C G T C G A T A C T G A C G T A G T C A C G T A C T G A C G T A C T G A C T G
A C G T A C G T A C G T A C G T A C G T A C G T T A C G T A G C C A G T A T C G G A C T A T C G A C G T

Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer

Match Rank:10
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:CGCTTGTCTGTGG-
----TGGGTGTGGC
 A G T C A C T G A T G C A C G T C G A T A C T G A C G T A G T C A C G T A C T G A C G T A C T G A C T G A C G T
A C G T A C G T A C G T A C G T C G A T A C T G A C T G A C T G A G C T A C T G A C G T C T A G C A T G G A T C