Information for 4-CCCGTCTGGTTCC (Motif 11)

A G T C A G T C A G T C A C T G A C G T A G T C A C G T A C T G A C T G A C G T A C G T A G T C A G T C
Reverse Opposite:
A C T G A C T G C G T A C G T A A G T C A G T C C G T A A C T G C G T A A G T C A C T G A C T G A C T G
p-value:1e-7
log p-value:-1.664e+01
Information Content per bp:1.530
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.48%
Number of Background Sequences with motif3.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets49.0 +/- 14.9bp
Average Position of motif in Background61.5 +/- 21.8bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:1
Score:0.69
Offset:1
Orientation:forward strand
Alignment:CCCGTCTGGTTCC
-CTGTCTGG----
 A G T C A G T C A G T C A C T G A C G T A G T C A C G T A C T G A C T G A C G T A C G T A G T C A G T C
A C G T A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G A C G T A C G T A C G T A C G T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-CCCGTCTGGTTCC
VBSYGTCTGG----
 A C G T A G T C A G T C A G T C A C T G A C G T A G T C A C G T A C T G A C T G A C G T A C G T A G T C A G T C
T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G A C G T A C G T A C G T A C G T

PB0060.1_Smad3_1/Jaspar

Match Rank:3
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---CCCGTCTGGTTCC-
NNTNNTGTCTGGNNTNG
 A C G T A C G T A C G T A G T C A G T C A G T C A C T G A C G T A G T C A C G T A C T G A C T G A C G T A C G T A G T C A G T C A C G T
C A G T A T C G C G A T T C A G T G C A G A C T A C T G C A G T A G T C A C G T T C A G T C A G G C T A G C A T C G A T G A C T C A T G

ETS:E-box(ETS,bHLH)/HPC7-Scl-ChIP-Seq(GSE22178)/Homer

Match Rank:4
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:CCCGTCTGGTTCC-
--CAGCTGTTTCCT
 A G T C A G T C A G T C A C T G A C G T A G T C A C G T A C T G A C T G A C G T A C G T A G T C A G T C A C G T
A C G T A C G T G T A C C G T A C A T G T A G C A G C T A C T G A G C T G C A T A C G T A G T C A G T C A G C T

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:5
Score:0.60
Offset:2
Orientation:forward strand
Alignment:CCCGTCTGGTTCC
--GGTCTGGCAT-
 A G T C A G T C A G T C A C T G A C G T A G T C A C G T A C T G A C T G A C G T A C G T A G T C A G T C
A C G T A C G T A T C G C T A G G A C T A G T C A C G T A C T G A T C G G T A C C G T A C G A T A C G T

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:6
Score:0.56
Offset:0
Orientation:forward strand
Alignment:CCCGTCTGGTTCC
GCCATCTGTT---
 A G T C A G T C A G T C A C T G A C G T A G T C A C G T A C T G A C T G A C G T A C G T A G T C A G T C
T C A G T G A C G T A C C G T A A C G T T G A C A C G T T C A G A G C T G A C T A C G T A C G T A C G T

NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer

Match Rank:7
Score:0.56
Offset:0
Orientation:forward strand
Alignment:CCCGTCTGGTTCC
ACCATCTGTT---
 A G T C A G T C A G T C A C T G A C G T A G T C A C G T A C T G A C T G A C G T A C G T A G T C A G T C
T C G A T G A C G T A C C G T A C A G T T G A C A C G T A C T G A G C T A G C T A C G T A C G T A C G T

PB0151.1_Myf6_2/Jaspar

Match Rank:8
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--CCCGTCTGGTTCC
GGNGCGNCTGTTNNN
 A C G T A C G T A G T C A G T C A G T C A C T G A C G T A G T C A C G T A C T G A C T G A C G T A C G T A G T C A G T C
C T A G A C T G G A C T A T C G A T G C A T C G A C T G G A T C A G C T C T A G A C G T A G C T A C T G A T G C A G C T

Olig2(bHLH)/Neuron-Olig2-ChIP-Seq(GSE30882)/Homer

Match Rank:9
Score:0.54
Offset:0
Orientation:forward strand
Alignment:CCCGTCTGGTTCC
RCCATMTGTT---
 A G T C A G T C A G T C A C T G A C G T A G T C A C G T A C T G A C T G A C G T A C G T A G T C A G T C
C T G A T G A C T G A C C G T A A C G T T G A C A G C T C T A G A C G T G A C T A C G T A C G T A C G T

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:10
Score:0.54
Offset:1
Orientation:forward strand
Alignment:CCCGTCTGGTTCC-
-CTGTCTGTCACCT
 A G T C A G T C A G T C A C T G A C G T A G T C A C G T A C T G A C T G A C G T A C G T A G T C A G T C A C G T
A C G T T A G C G C A T T C A G A C G T A G T C A C G T T A C G C A G T A T G C G C T A T A G C G A T C G A C T