p-value: | 1e-8 |
log p-value: | -2.038e+01 |
Information Content per bp: | 1.538 |
Number of Target Sequences with motif | 7.0 |
Percentage of Target Sequences with motif | 0.84% |
Number of Background Sequences with motif | 1.2 |
Percentage of Background Sequences with motif | 0.03% |
Average Position of motif in Targets | 66.9 +/- 29.5bp |
Average Position of motif in Background | 53.7 +/- 13.3bp |
Strand Bias (log2 ratio + to - strand density) | -0.4 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
PB0134.1_Hnf4a_2/Jaspar
Match Rank: | 1 |
Score: | 0.66 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --ATGGTACTTT---- NNATTGGACTTTNGNN |
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Mouse_Recombination_Hotspot(Zf)/Testis-DMC1-ChIP-Seq(GSE24438)/Homer
Match Rank: | 2 |
Score: | 0.63 |
Offset: | -10 |
Orientation: | forward strand |
Alignment: | ----------ATGGTACTTT ACTYKNATTCGTGNTACTTC |
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POU3F3/MA0788.1/Jaspar
Match Rank: | 3 |
Score: | 0.61 |
Offset: | -3 |
Orientation: | forward strand |
Alignment: | ---ATGGTACTTT ATTATGCTAATTT |
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PB0152.1_Nkx3-1_2/Jaspar
Match Rank: | 4 |
Score: | 0.58 |
Offset: | -3 |
Orientation: | reverse strand |
Alignment: | ---ATGGTACTTT---- TTCNAAGTACTTNNNNN |
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NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer
Match Rank: | 5 |
Score: | 0.58 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | ATGGTACTTT-- --GGGAATTTCC |
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POU3F1/MA0786.1/Jaspar
Match Rank: | 6 |
Score: | 0.57 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --ATGGTACTTT TTATGCAAATTA |
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POU3F2/MA0787.1/Jaspar
Match Rank: | 7 |
Score: | 0.57 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --ATGGTACTTT TTATGCAAATTA |
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Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer
Match Rank: | 8 |
Score: | 0.57 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -ATGGTACTTT- TATGCWAATBAV |
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Foxd3/MA0041.1/Jaspar
Match Rank: | 9 |
Score: | 0.56 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --ATGGTACTTT GAATGTTTGTTT |
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Hnf4a/MA0114.3/Jaspar
Match Rank: | 10 |
Score: | 0.55 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | ATGGTACTTT------ ATTGGACTTTGACCCC |
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