p-value: | 1e-10 |
log p-value: | -2.432e+01 |
Information Content per bp: | 1.847 |
Number of Target Sequences with motif | 11.0 |
Percentage of Target Sequences with motif | 1.32% |
Number of Background Sequences with motif | 3.7 |
Percentage of Background Sequences with motif | 0.08% |
Average Position of motif in Targets | 49.3 +/- 27.0bp |
Average Position of motif in Background | 77.8 +/- 14.6bp |
Strand Bias (log2 ratio + to - strand density) | 0.3 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer
Match Rank: | 1 |
Score: | 0.58 |
Offset: | 3 |
Orientation: | forward strand |
Alignment: | GAGACGCACT--- ---AAGCACTTAA |
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Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer
Match Rank: | 2 |
Score: | 0.57 |
Offset: | 3 |
Orientation: | reverse strand |
Alignment: | GAGACGCACT--- ---MRSCACTYAA |
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ZNF692(Zf)/HEK293-ZNF692.GFP-ChIP-Seq(GSE58341)/Homer
Match Rank: | 3 |
Score: | 0.57 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -GAGACGCACT TGGGGCCCAC- |
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Ahr::Arnt/MA0006.1/Jaspar
Match Rank: | 4 |
Score: | 0.56 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | GAGACGCACT --CACGCA-- |
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PB0160.1_Rfxdc2_2/Jaspar
Match Rank: | 5 |
Score: | 0.56 |
Offset: | -7 |
Orientation: | forward strand |
Alignment: | -------GAGACGCACT CTACTTGGATACGGAAT |
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Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer
Match Rank: | 6 |
Score: | 0.56 |
Offset: | 3 |
Orientation: | forward strand |
Alignment: | GAGACGCACT--- ---AASCACTCAA |
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Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer
Match Rank: | 7 |
Score: | 0.56 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -GAGACGCACT TBGCACGCAA- |
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PB0151.1_Myf6_2/Jaspar
Match Rank: | 8 |
Score: | 0.56 |
Offset: | -5 |
Orientation: | forward strand |
Alignment: | -----GAGACGCACT AGCAACAGCCGCACC |
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Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer
Match Rank: | 9 |
Score: | 0.54 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -GAGACGCACT CCAGACRSVB- |
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PB0143.1_Klf7_2/Jaspar
Match Rank: | 10 |
Score: | 0.54 |
Offset: | -3 |
Orientation: | forward strand |
Alignment: | ---GAGACGCACT---- AAGCATACGCCCAACTT |
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