Information for 7-AGAGKCCTGGCTG (Motif 17)

G T C A C T A G C G T A A C T G A C G T A T G C A G T C C G A T A C T G A T C G A G T C G A C T A C T G
Reverse Opposite:
A G T C C G T A A C T G A T G C A G T C C G T A C T A G T A C G T G C A A G T C A C G T A G T C A C G T
p-value:1e-12
log p-value:-2.861e+01
Information Content per bp:1.804
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.32%
Number of Background Sequences with motif2.3
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets31.0 +/- 20.9bp
Average Position of motif in Background57.2 +/- 19.8bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:1
Score:0.60
Offset:2
Orientation:forward strand
Alignment:AGAGKCCTGGCTG
--AGGCCTNG---
 G T C A C T A G C G T A A C T G A C G T A T G C A G T C C G A T A C T G A T C G A G T C G A C T A C T G
A C G T A C G T C T G A A C T G A C T G A G T C A G T C A G C T C T A G T A C G A C G T A C G T A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:2
Score:0.59
Offset:6
Orientation:forward strand
Alignment:AGAGKCCTGGCTG-
------TWGTCTGV
 G T C A C T A G C G T A A C T G A C G T A T G C A G T C C G A T A C T G A T C G A G T C G A C T A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:3
Score:0.58
Offset:2
Orientation:forward strand
Alignment:AGAGKCCTGGCTG
--AGGCCTAG---
 G T C A C T A G C G T A A C T G A C G T A T G C A G T C C G A T A C T G A T C G A G T C G A C T A C T G
A C G T A C G T T G C A A C T G T A C G A T G C A G T C G A C T T C G A A T C G A C G T A C G T A C G T

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:4
Score:0.57
Offset:1
Orientation:forward strand
Alignment:AGAGKCCTGGCTG
-GAGSCCGAGC--
 G T C A C T A G C G T A A C T G A C G T A T G C A G T C C G A T A C T G A T C G A G T C G A C T A C T G
A C G T A C T G C G T A A C T G A T G C T G A C G A T C A T C G T G C A A C T G A G T C A C G T A C G T

PB0151.1_Myf6_2/Jaspar

Match Rank:5
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:AGAGKCCTGGCTG-----
---GGNGCGNCTGTTNNN
 G T C A C T A G C G T A A C T G A C G T A T G C A G T C C G A T A C T G A T C G A G T C G A C T A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C T A G A C T G G A C T A T C G A T G C A T C G A C T G G A T C A G C T C T A G A C G T A G C T A C T G A T G C A G C T

PB0180.1_Sp4_2/Jaspar

Match Rank:6
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-AGAGKCCTGGCTG-
CAAAGGCGTGGCCAG
 A C G T G T C A C T A G C G T A A C T G A C G T A T G C A G T C C G A T A C T G A T C G A G T C G A C T A C T G A C G T
A G T C C G T A C G T A T C G A A T C G A C T G G T A C A C T G A C G T C T A G A C T G G A T C G A T C G T C A C A T G

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:7
Score:0.55
Offset:6
Orientation:forward strand
Alignment:AGAGKCCTGGCTG-
------CTGTCTGG
 G T C A C T A G C G T A A C T G A C G T A T G C A G T C C G A T A C T G A T C G A G T C G A C T A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G

Zfp809(Zf)/ES-Zfp809-ChIP-Seq(GSE70799)/Homer

Match Rank:8
Score:0.55
Offset:1
Orientation:forward strand
Alignment:AGAGKCCTGGCTG---
-GGGGCTYGKCTGGGA
 G T C A C T A G C G T A A C T G A C G T A T G C A G T C C G A T A C T G A T C G A G T C G A C T A C T G A C G T A C G T A C G T
A C G T C T A G C A T G C A T G T A C G A G T C G C A T A G C T C T A G A C G T A G T C G A C T A C T G A C T G A C T G T C G A

POL010.1_DCE_S_III/Jaspar

Match Rank:9
Score:0.54
Offset:8
Orientation:reverse strand
Alignment:AGAGKCCTGGCTG
--------NGCTN
 G T C A C T A G C G T A A C T G A C G T A T G C A G T C C G A T A C T G A T C G A G T C G A C T A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G A C T G A G T C A C G T A T C G

POL009.1_DCE_S_II/Jaspar

Match Rank:10
Score:0.53
Offset:9
Orientation:forward strand
Alignment:AGAGKCCTGGCTG--
---------GCTGTG
 G T C A C T A G C G T A A C T G A C G T A T G C A G T C C G A T A C T G A T C G A G T C G A C T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G T A G C C A G T A T C G G A C T A T C G