Information for 5-TTTAATGCAG (Motif 8)

G A C T A C G T C G A T T C G A C G T A A C G T A C T G G T A C C G T A C A T G
Reverse Opposite:
G T A C A C G T A C T G G T A C G T C A A C G T A G C T C G T A G T C A C G T A
p-value:1e-12
log p-value:-2.773e+01
Information Content per bp:1.802
Number of Target Sequences with motif16.0
Percentage of Target Sequences with motif1.95%
Number of Background Sequences with motif77.0
Percentage of Background Sequences with motif0.16%
Average Position of motif in Targets46.4 +/- 27.2bp
Average Position of motif in Background44.6 +/- 27.5bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Arid3a/MA0151.1/Jaspar

Match Rank:1
Score:0.74
Offset:0
Orientation:reverse strand
Alignment:TTTAATGCAG
TTTAAT----
 G A C T A C G T C G A T T C G A C G T A A C G T A C T G G T A C C G T A C A T G
G C A T A C G T A C G T C T G A C G T A A C G T A C G T A C G T A C G T A C G T

Nkx6.1(Homeobox)/Islet-Nkx6.1-ChIP-Seq(GSE40975)/Homer

Match Rank:2
Score:0.66
Offset:0
Orientation:forward strand
Alignment:TTTAATGCAG
GKTAATGR--
 G A C T A C G T C G A T T C G A C G T A A C G T A C T G G T A C C G T A C A T G
A C T G C A G T A C G T C G T A C G T A A C G T A C T G C T G A A C G T A C G T

PB0028.1_Hbp1_1/Jaspar

Match Rank:3
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---TTTAATGCAG---
ACTATGAATGAATGAT
 A C G T A C G T A C G T G A C T A C G T C G A T T C G A C G T A A C G T A C T G G T A C C G T A C A T G A C G T A C G T A C G T
G C T A G T A C C G A T G C T A G C A T T A C G C G T A C G T A C G A T A C T G C T G A T C G A G A C T C A T G C T G A A G C T

PB0001.1_Arid3a_1/Jaspar

Match Rank:4
Score:0.64
Offset:-4
Orientation:reverse strand
Alignment:----TTTAATGCAG---
NNNTTTTAATTAANNNN
 A C G T A C G T A C G T A C G T G A C T A C G T C G A T T C G A C G T A A C G T A C T G G T A C C G T A C A T G A C G T A C G T A C G T
C T A G C G T A C G T A C A G T G C A T G A C T A G C T C T G A C G T A C G A T G A C T T C G A C T G A C G T A T G A C T A G C A T G C

PB0005.1_Bbx_1/Jaspar

Match Rank:5
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---TTTAATGCAG--
TAATTCAATGAAGTG
 A C G T A C G T A C G T G A C T A C G T C G A T T C G A C G T A A C G T A C T G G T A C C G T A C A T G A C G T A C G T
G C A T G C T A C T G A C G A T C G A T T G A C G C T A C G T A C G A T A C T G C G T A G C T A A T C G G C A T C T A G

NKX6-2/MA0675.1/Jaspar

Match Rank:6
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:TTTAATGCAG
-TTAATTAN-
 G A C T A C G T C G A T T C G A C G T A A C G T A C T G G T A C C G T A C A T G
A C G T C G A T G A C T C G T A C G T A C G A T C A G T C T G A T A C G A C G T

GSX2/MA0893.1/Jaspar

Match Rank:7
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:TTTAATGCAG
NTTAATTAGN
 G A C T A C G T C G A T T C G A C G T A A C G T A C T G G T A C C G T A C A T G
C A G T A G C T C G A T C G T A C G T A G C A T C A G T C T G A T A C G C A G T

Pou5f1::Sox2/MA0142.1/Jaspar

Match Rank:8
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---TTTAATGCAG--
CTTTGTTATGCAAAT
 A C G T A C G T A C G T G A C T A C G T C G A T T C G A C G T A A C G T A C T G G T A C C G T A C A T G A C G T A C G T
A G T C G C A T A G C T C A G T T A C G C G A T G A C T G C T A C G A T A C T G A G T C C G T A C T G A C T G A C A G T

PH0150.1_Pou4f3/Jaspar

Match Rank:9
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----TTTAATGCAG--
AGTTATTAATGAGGTC
 A C G T A C G T A C G T A C G T G A C T A C G T C G A T T C G A C G T A A C G T A C T G G T A C C G T A C A T G A C G T A C G T
G C T A T C A G C A G T G C A T C G T A G A C T C G A T C G T A C G T A G A C T C A T G G T C A C T A G A C T G G A C T G A T C

Arid3b/MA0601.1/Jaspar

Match Rank:10
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--TTTAATGCAG
ATATTAATTAA-
 A C G T A C G T G A C T A C G T C G A T T C G A C G T A A C G T A C T G G T A C C G T A C A T G
C G T A C G A T G C T A C G A T A C G T C G T A C G T A C G A T G C A T C G T A C G T A A C G T