Information for 4-GTGGCDCTGTGCAACC (Motif 3)

C A T G A C G T A C T G A C T G A G T C C G T A A G T C A C G T T C A G A G C T A C T G A T G C C G T A G T C A G T A C G T A C
Reverse Opposite:
A C T G A C T G A C G T A C G T A T C G T G A C C T G A A G T C C G T A C T A G G A C T A C T G A G T C A G T C C G T A G T A C
p-value:1e-16
log p-value:-3.709e+01
Information Content per bp:1.790
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.85%
Number of Background Sequences with motif1.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets49.0 +/- 20.3bp
Average Position of motif in Background37.1 +/- 19.1bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFIC::TLX1/MA0119.1/Jaspar

Match Rank:1
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:GTGGCDCTGTGCAACC
TTGGCATGGTGCCA--
 C A T G A C G T A C T G A C T G A G T C C G T A A G T C A C G T T C A G A G C T A C T G A T G C C G T A G T C A G T A C G T A C
G A C T A C G T A C T G A C T G A G T C C G T A G A C T A T C G A T C G C A G T A C T G A G T C A G T C C G T A A C G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:2
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-GTGGCDCTGTGCAACC
NTTGGCANN--------
 A C G T C A T G A C G T A C T G A C T G A G T C C G T A A G T C A C G T T C A G A G C T A C T G A T G C C G T A G T C A G T A C G T A C
A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NFIC/MA0161.1/Jaspar

Match Rank:3
Score:0.58
Offset:0
Orientation:forward strand
Alignment:GTGGCDCTGTGCAACC
TTGGCA----------
 C A T G A C G T A C T G A C T G A G T C C G T A A G T C A C G T T C A G A G C T A C T G A T G C C G T A G T C A G T A C G T A C
G A C T C A G T T C A G C T A G G T A C C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:4
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-GTGGCDCTGTGCAACC
CTTGGCANNNTGCCAA-
 A C G T C A T G A C G T A C T G A C T G A G T C C G T A A G T C A C G T T C A G A G C T A C T G A T G C C G T A G T C A G T A C G T A C
A G T C G A C T C A G T A C T G C T A G T G A C G C T A A T G C G C A T A T C G C G A T A C T G G A T C G T A C G T C A C T G A A C G T

Hic1/MA0739.1/Jaspar

Match Rank:5
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--GTGGCDCTGTGCAACC
GGTTGGCAT---------
 A C G T A C G T C A T G A C G T A C T G A C T G A G T C C G T A A G T C A C G T T C A G A G C T A C T G A T G C C G T A G T C A G T A C G T A C
T C A G T A C G A G C T C A G T C A T G A T C G A G T C T C G A A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NFIA/MA0670.1/Jaspar

Match Rank:6
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--GTGGCDCTGTGCAACC
NNTTGGCANN--------
 A C G T A C G T C A T G A C G T A C T G A C T G A G T C C G T A A G T C A C G T T C A G A G C T A C T G A T G C C G T A G T C A G T A C G T A C
G C T A A G T C A C G T A C G T A C T G A C T G A G T C C G T A G T A C A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0113.1_E2F3_2/Jaspar

Match Rank:7
Score:0.54
Offset:-4
Orientation:reverse strand
Alignment:----GTGGCDCTGTGCAACC
NNNNTTGGCGCCGANNN---
 A C G T A C G T A C G T A C G T C A T G A C G T A C T G A C T G A G T C C G T A A G T C A C G T T C A G A G C T A C T G A T G C C G T A G T C A G T A C G T A C
T A C G T A G C A C G T G A C T A C G T G C A T C T A G A T C G G T A C A C T G A T G C A G T C C T A G G C T A C T A G A T G C C A G T A C G T A C G T A C G T

PB0112.1_E2F2_2/Jaspar

Match Rank:8
Score:0.53
Offset:-4
Orientation:reverse strand
Alignment:----GTGGCDCTGTGCAACC
NNNNTTGGCGCCGANNN---
 A C G T A C G T A C G T A C G T C A T G A C G T A C T G A C T G A G T C C G T A A G T C A C G T T C A G A G C T A C T G A T G C C G T A G T C A G T A C G T A C
T A G C T G A C A G C T A G C T C A G T G A C T C T A G A T C G G T A C A C T G T A G C G A T C C T A G G C T A T C G A A T C G C A T G A C G T A C G T A C G T

CEBP(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:9
Score:0.51
Offset:5
Orientation:forward strand
Alignment:GTGGCDCTGTGCAACC
-----ATTGCGCAAC-
 C A T G A C G T A C T G A C T G A G T C C G T A A G T C A C G T T C A G A G C T A C T G A T G C C G T A G T C A G T A C G T A C
A C G T A C G T A C G T A C G T A C G T T G C A A G C T A C G T C T A G G A T C C T A G G A T C G T C A C T G A A G T C A C G T

PB0029.1_Hic1_1/Jaspar

Match Rank:10
Score:0.51
Offset:-6
Orientation:reverse strand
Alignment:------GTGGCDCTGTGCAACC
NGTAGGTTGGCATNNN------
 A C G T A C G T A C G T A C G T A C G T A C G T C A T G A C G T A C T G A C T G A G T C C G T A A G T C A C G T T C A G A G C T A C T G A T G C C G T A G T C A G T A C G T A C
C T A G C T A G A G C T C G T A T C A G T C A G A C G T C A G T A C T G A T C G A G T C C G T A G A C T T G C A T C A G G C A T A C G T A C G T A C G T A C G T A C G T A C G T