Information for 9-TAGGGACCTC (Motif 18)

A C G T C G T A A C T G A C T G A C T G C G T A A G T C A G T C A C G T A G T C
Reverse Opposite:
A C T G C G T A A C T G A C T G A C G T A G T C A G T C A G T C A C G T C G T A
p-value:1e-3
log p-value:-7.481e+00
Information Content per bp:1.530
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif0.24%
Number of Background Sequences with motif2.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets49.5 +/- 25.5bp
Average Position of motif in Background42.5 +/- 17.4bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)2.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer

Match Rank:1
Score:0.78
Offset:-3
Orientation:reverse strand
Alignment:---TAGGGACCTC
GGTTAGAGACCT-
 A C G T A C G T A C G T A C G T C G T A A C T G A C T G A C T G C G T A A G T C A G T C A C G T A G T C
C T A G T A C G C G A T A C G T C G T A T C A G C T G A T C A G G T C A T G A C A G T C G A C T A C G T

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:2
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:TAGGGACCTC-
---TGACCYCT
 A C G T C G T A A C T G A C T G A C T G C G T A A G T C A G T C A C G T A G T C A C G T
A C G T A C G T A C G T A G C T T C A G T G C A G T A C T G A C A G C T A G T C A G C T

NR4A2/MA0160.1/Jaspar

Match Rank:3
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:TAGGGACCTC
--GTGACCTT
 A C G T C G T A A C T G A C T G A C T G C G T A A G T C A G T C A C G T A G T C
A C G T A C G T A C T G A C G T C T A G C G T A A G T C G T A C A G C T A G C T

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:4
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:TAGGGACCTC
---TGACCT-
 A C G T C G T A A C T G A C T G A C T G C G T A A G T C A G T C A C G T A G T C
A C G T A C G T A C G T A C G T C A T G G C T A G T A C G T A C G A C T A C G T

LRF(Zf)/Erythroblasts-ZBTB7A-ChIP-Seq(GSE74977)/Homer

Match Rank:5
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-TAGGGACCTC
NRRGGGTCTT-
 A C G T A C G T C G T A A C T G A C T G A C T G C G T A A G T C A G T C A C G T A G T C
A C T G T C G A C T A G A C T G A C T G A C T G A C G T A G T C A C G T A G C T A C G T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:6
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:TAGGGACCTC-
---TGACCTYA
 A C G T C G T A A C T G A C T G A C T G C G T A A G T C A G T C A C G T A G T C A C G T
A C G T A C G T A C G T A G C T C T A G G C T A T G A C A T G C A G C T A G T C C G T A

PB0196.1_Zbtb7b_2/Jaspar

Match Rank:7
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-TAGGGACCTC------
CATAAGACCACCATTAC
 A C G T A C G T C G T A A C T G A C T G A C T G C G T A A G T C A G T C A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A G T C C G A T C A G T C T G A T G C A A C T G G T C A G A T C A T G C G T C A G A T C G A T C G C T A A C G T C A G T C T G A A G C T

ZNF692(Zf)/HEK293-ZNF692.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:8
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:TAGGGACCTC
TGGGGCCCAC
 A C G T C G T A A C T G A C T G A C T G C G T A A G T C A G T C A C G T A G T C
G A C T C T A G A C T G A C T G T A C G A G T C A G T C A G T C C T G A A T G C

GLI2/MA0734.1/Jaspar

Match Rank:9
Score:0.55
Offset:2
Orientation:forward strand
Alignment:TAGGGACCTC----
--GCGACCACACTG
 A C G T C G T A A C T G A C T G A C T G C G T A A G T C A G T C A C G T A G T C A C G T A C G T A C G T A C G T
A C G T A C G T C T A G T G A C C A T G T G C A A G T C A T G C G T C A A T G C T G C A G T A C C G A T C T A G

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:10
Score:0.55
Offset:2
Orientation:forward strand
Alignment:TAGGGACCTC--
--NTGACCTTGA
 A C G T C G T A A C T G A C T G A C T G C G T A A G T C A G T C A C G T A G T C A C G T A C G T
A C G T A C G T C A T G A G C T T A C G G T C A G T A C T A G C A G C T G A C T A T C G T C G A