Information for 6-GGGAGAGRTCAYARCA (Motif 6)

T A C G A C T G C T A G C G T A C T A G C T G A C T A G C T A G C G A T G T A C C T G A A G T C C G T A C T G A G T A C T G C A
Reverse Opposite:
A C G T C A T G A G C T C G A T C T A G A G C T A C T G C G T A A G T C A G T C A G C T A G T C A C G T A G T C A G T C A T G C
p-value:1e-13
log p-value:-3.147e+01
Information Content per bp:1.751
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.79%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets52.1 +/- 25.1bp
Average Position of motif in Background30.3 +/- 13.9bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.17
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:1
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-GGGAGAGRTCAYARCA
ANGNAAAGGTCA-----
 A C G T T A C G A C T G C T A G C G T A C T A G C T G A C T A G C T A G C G A T G T A C C T G A A G T C C G T A C T G A G T A C T G C A
C T G A A C T G C A T G C A G T C G T A C G T A C G T A A C T G A C T G A C G T A G T C C G T A A C G T A C G T A C G T A C G T A C G T

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:2
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---GGGAGAGRTCAYARCA
TAGGGCAAAGGTCA-----
 A C G T A C G T A C G T T A C G A C T G C T A G C G T A C T A G C T G A C T A G C T A G C G A T G T A C C T G A A G T C C G T A C T G A G T A C T G C A
A G C T C T G A C T A G C T A G A C T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C T C G A A C G T A C G T A C G T A C G T A C G T

PB0118.1_Esrra_2/Jaspar

Match Rank:3
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-GGGAGAGRTCAYARCA
GGCGAGGGGTCAAGGGC
 A C G T T A C G A C T G C T A G C G T A C T A G C T G A C T A G C T A G C G A T G T A C C T G A A G T C C G T A C T G A G T A C T G C A
T A C G C A T G A T G C A C T G G C T A T A C G T C A G C A T G A C T G C G A T A G T C C T G A G C T A C T A G A T C G A T C G G T A C

PB0120.1_Foxj1_2/Jaspar

Match Rank:4
Score:0.58
Offset:5
Orientation:forward strand
Alignment:GGGAGAGRTCAYARCA----
-----ATGTCACAACAACAC
 T A C G A C T G C T A G C G T A C T A G C T G A C T A G C T A G C G A T G T A C C T G A A G T C C G T A C T G A G T A C T G C A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G T A A G C T T C A G A C G T T A G C T C G A A G T C C T G A G T C A T G A C C G T A C T G A A T G C T C G A G T A C

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:5
Score:0.58
Offset:3
Orientation:forward strand
Alignment:GGGAGAGRTCAYARCA
---AGRGGTCA-----
 T A C G A C T G C T A G C G T A C T A G C T G A C T A G C T A G C G A T G T A C C T G A A G T C C G T A C T G A G T A C T G C A
A C G T A C G T A C G T T C G A T C A G T C G A A C T G C A T G A C G T A G T C C T G A A C G T A C G T A C G T A C G T A C G T

Pparg::Rxra/MA0065.2/Jaspar

Match Rank:6
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----GGGAGAGRTCAYARCA
GTAGGGCAAAGGTCA-----
 A C G T A C G T A C G T A C G T T A C G A C T G C T A G C G T A C T A G C T G A C T A G C T A G C G A T G T A C C T G A A G T C C G T A C T G A G T A C T G C A
A T C G A G C T C T G A C T A G C T A G C A T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C G C T A A C G T A C G T A C G T A C G T A C G T

PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer

Match Rank:7
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---GGGAGAGRTCAYARCA
TGGGGCAAAGGTCA-----
 A C G T A C G T A C G T T A C G A C T G C T A G C G T A C T A G C T G A C T A G C T A G C G A T G T A C C T G A A G T C C G T A C T G A G T A C T G C A
C A G T C T A G C A T G C T A G C A T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C G C T A A C G T A C G T A C G T A C G T A C G T

PB0049.1_Nr2f2_1/Jaspar

Match Rank:8
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-GGGAGAGRTCAYARCA
TCTCAAAGGTCACGAG-
 A C G T T A C G A C T G C T A G C G T A C T A G C T G A C T A G C T A G C G A T G T A C C T G A A G T C C G T A C T G A G T A C T G C A
C A G T G T A C A C G T G T A C C G T A C T G A C T G A A C T G A C T G A C G T A G T C C T G A G T A C T A C G C G T A A C T G A C G T

PH0012.1_Cdx1/Jaspar

Match Rank:9
Score:0.55
Offset:3
Orientation:forward strand
Alignment:GGGAGAGRTCAYARCA---
---TAAGGTAATAAAATTA
 T A C G A C T G C T A G C G T A C T A G C T G A C T A G C T A G C G A T G T A C C T G A A G T C C G T A C T G A G T A C T G C A A C G T A C G T A C G T
A C G T A C G T A C G T C G A T C T G A T G C A C T A G T C A G G A C T G T C A C T G A C G A T G C T A C G T A G C T A G C T A A G C T C A G T G C T A

PH0037.1_Hdx/Jaspar

Match Rank:10
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-GGGAGAGRTCAYARCA
AAGGCGAAATCATCGCA
 A C G T T A C G A C T G C T A G C G T A C T A G C T G A C T A G C T A G C G A T G T A C C T G A A G T C C G T A C T G A G T A C T G C A
C G T A C T G A A C T G C A T G G T A C C T A G T G C A C G T A C G T A A C G T A T G C G C T A G A C T G A T C A T C G G T A C T G C A