Information for 8-GCGTTTGCAGGAT (Motif 3)

A C T G A G T C C T A G A C G T A G C T A C G T A C T G A G T C C G T A A C T G A C T G G T C A A C G T
Reverse Opposite:
G T C A A C G T A G T C A G T C C G A T A C T G A G T C C G T A C T G A C G T A A G T C A C T G A G T C
p-value:1e-16
log p-value:-3.757e+01
Information Content per bp:1.936
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.92%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets43.7 +/- 17.7bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer

Match Rank:1
Score:0.57
Offset:5
Orientation:reverse strand
Alignment:GCGTTTGCAGGAT--
-----ANCAGGATGT
 A C T G A G T C C T A G A C G T A G C T A C G T A C T G A G T C C G T A A C T G A C T G G T C A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G T A T A G C G T A C G T C A A C T G A C T G C G T A C G A T T A C G A G C T

PB0044.1_Mtf1_1/Jaspar

Match Rank:2
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---GCGTTTGCAGGAT
GGGCCGTGTGCAAAAA
 A C G T A C G T A C G T A C T G A G T C C T A G A C G T A G C T A C G T A C T G A G T C C G T A A C T G A C T G G T C A A C G T
C A T G A C T G C T A G G A T C G T A C C A T G C A G T A C T G G A C T C A T G G T A C C G T A T G C A G T C A C T G A G C A T

STAT4(Stat)/CD4-Stat4-ChIP-Seq(GSE22104)/Homer

Match Rank:3
Score:0.55
Offset:2
Orientation:forward strand
Alignment:GCGTTTGCAGGAT-
--NTTTCCNGGAAA
 A C T G A G T C C T A G A C G T A G C T A C G T A C T G A G T C C G T A A C T G A C T G G T C A A C G T A C G T
A C G T A C G T T C A G A G C T A C G T A C G T G T A C G A T C C G T A C T A G C A T G G T C A C G T A T C G A

Bcl6(Zf)/Liver-Bcl6-ChIP-Seq(GSE31578)/Homer

Match Rank:4
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-GCGTTTGCAGGAT-
NNNCTTTCCAGGAAA
 A C G T A C T G A G T C C T A G A C G T A G C T A C G T A C T G A G T C C G T A A C T G A C T G G T C A A C G T A C G T
G A C T C G A T T C A G G A T C G A C T A G C T A G C T A G T C G A T C C G T A C T A G C T A G T C G A T C G A C T G A

CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:5
Score:0.54
Offset:4
Orientation:reverse strand
Alignment:GCGTTTGCAGGAT-
----TTGCAACATN
 A C T G A G T C C T A G A C G T A G C T A C G T A C T G A G T C C G T A A C T G A C T G G T C A A C G T A C G T
A C G T A C G T A C G T A C G T C A G T A C G T C T A G A G T C G T C A C G T A G A T C G C T A A G C T G A T C

STAT1(Stat)/HelaS3-STAT1-ChIP-Seq(GSE12782)/Homer

Match Rank:6
Score:0.54
Offset:1
Orientation:forward strand
Alignment:GCGTTTGCAGGAT--
-NATTTCCNGGAAAT
 A C T G A G T C C T A G A C G T A G C T A C G T A C T G A G T C C G T A A C T G A C T G G T C A A C G T A C G T A C G T
A C G T A T G C C T G A G A C T A C G T A C G T G T A C G A T C C G A T C T A G C A T G C G T A C G T A C T G A G A C T

STAT1/MA0137.3/Jaspar

Match Rank:7
Score:0.54
Offset:3
Orientation:forward strand
Alignment:GCGTTTGCAGGAT-
---TTTCCAGGAAA
 A C T G A G T C C T A G A C G T A G C T A C G T A C T G A G T C C G T A A C T G A C T G G T C A A C G T A C G T
A C G T A C G T A C G T A C G T A G C T A C G T T G A C G A T C C T G A C T A G C A T G C T G A G T C A C T G A

Stat3+il21(Stat)/CD4-Stat3-ChIP-Seq(GSE19198)/Homer

Match Rank:8
Score:0.54
Offset:1
Orientation:forward strand
Alignment:GCGTTTGCAGGAT--
-NNCTTCCNGGAAGN
 A C T G A G T C C T A G A C G T A G C T A C G T A C T G A G T C C G T A A C T G A C T G G T C A A C G T A C G T A C G T
A C G T A T G C T C G A A G T C A G C T A C G T G T A C A G T C G C T A C T A G C A T G G T C A C T G A T C A G A G T C

POU2F2/MA0507.1/Jaspar

Match Rank:9
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-GCGTTTGCAGGAT
TTCATTTGCATAT-
 A C G T A C T G A G T C C T A G A C G T A G C T A C G T A C T G A G T C C G T A A C T G A C T G G T C A A C G T
G A C T C A G T G T A C G C T A A C G T G C A T A C G T C T A G A G T C G T C A A G C T C T G A G C A T A C G T

PB0145.1_Mafb_2/Jaspar

Match Rank:10
Score:0.52
Offset:1
Orientation:forward strand
Alignment:GCGTTTGCAGGAT---
-CAATTGCAAAAATAT
 A C T G A G T C C T A G A C G T A G C T A C G T A C T G A G T C C G T A A C T G A C T G G T C A A C G T A C G T A C G T A C G T
A C G T G T A C T C G A C G T A A C G T A C G T A C T G G A T C C T G A C G T A G C T A C G T A C G T A G C A T C T G A G C A T