Information for 11-GTAGATCTAT (Motif 28)

A C T G C G A T T C G A C T A G C G T A A G C T G A T C A C G T C T G A A C G T
Reverse Opposite:
G T C A A G C T T C G A C T A G C T G A C G A T G A T C A G C T C G T A T G A C
p-value:1e-7
log p-value:-1.670e+01
Information Content per bp:1.779
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.18%
Number of Background Sequences with motif44.1
Percentage of Background Sequences with motif0.09%
Average Position of motif in Targets36.1 +/- 27.9bp
Average Position of motif in Background47.9 +/- 28.9bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HNF6(Homeobox)/Liver-Hnf6-ChIP-Seq(ERP000394)/Homer

Match Rank:1
Score:0.68
Offset:2
Orientation:reverse strand
Alignment:GTAGATCTAT--
--DGATCRATAN
 A C T G C G A T T C G A C T A G C G T A A G C T G A T C A C G T C T G A A C G T A C G T A C G T
A C G T A C G T C T A G C T A G C T G A A C G T A G T C C T A G C G T A A C G T G T C A G A T C

Cux2(Homeobox)/Liver-Cux2-ChIP-Seq(GSE35985)/Homer

Match Rank:2
Score:0.64
Offset:0
Orientation:forward strand
Alignment:GTAGATCTAT
HNRAATCAAT
 A C T G C G A T T C G A C T A G C G T A A G C T G A T C A C G T C T G A A C G T
G C T A A C T G T C G A C T G A C T G A A C G T T A G C C T G A C G T A C G A T

PB0198.1_Zfp128_2/Jaspar

Match Rank:3
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-GTAGATCTAT---
TGTATATATATACC
 A C G T A C T G C G A T T C G A C T A G C G T A A G C T G A T C A C G T C T G A A C G T A C G T A C G T A C G T
C A G T C A T G G C A T C T G A G C A T C T G A G A C T C G T A G A C T C G T A G A C T C G T A T G A C A T G C

PB0144.1_Lef1_2/Jaspar

Match Rank:4
Score:0.59
Offset:0
Orientation:forward strand
Alignment:GTAGATCTAT------
GAAGATCAATCACTTA
 A C T G C G A T T C G A C T A G C G T A A G C T G A T C A C G T C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
T A C G C G T A T C G A T A C G G C T A C G A T A G T C C G T A C T G A C A G T G A T C C T G A G T A C A G C T G C A T C G T A

CUX1/MA0754.1/Jaspar

Match Rank:5
Score:0.59
Offset:2
Orientation:forward strand
Alignment:GTAGATCTAT--
--TAATCGATAA
 A C T G C G A T T C G A C T A G C G T A A G C T G A T C A C G T C T G A A C G T A C G T A C G T
A C G T A C G T G A C T C T G A C T G A A G C T A G T C T C A G C G T A G C A T T G C A G T C A

PB0188.1_Tcf7l2_2/Jaspar

Match Rank:6
Score:0.59
Offset:0
Orientation:forward strand
Alignment:GTAGATCTAT------
GAAGATCAATCACTAA
 A C T G C G A T T C G A C T A G C G T A A G C T G A T C A C G T C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
T A C G C T A G T C G A T A C G G C T A G C A T A G T C C G T A C T G A C A G T G A T C C T G A A T G C A C G T G C T A C G T A

ZBTB12(Zf)/HEK293-ZBTB12.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:7
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-GTAGATCTAT----
BCNGGTTCTAGANCN
 A C G T A C T G C G A T T C G A C T A G C G T A A G C T G A T C A C G T C T G A A C G T A C G T A C G T A C G T A C G T
A G C T T G A C C T A G C A T G C T A G G A C T A C G T A G T C A G C T C T G A T A C G T C G A C G A T A G T C G A C T

CUX2/MA0755.1/Jaspar

Match Rank:8
Score:0.57
Offset:2
Orientation:forward strand
Alignment:GTAGATCTAT--
--TAATCGATAA
 A C T G C G A T T C G A C T A G C G T A A G C T G A T C A C G T C T G A A C G T A C G T A C G T
A C G T A C G T G C A T C T G A C T G A A G C T A G T C C T A G C G T A G C A T G C T A G C T A

Hoxa9/MA0594.1/Jaspar

Match Rank:9
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:GTAGATCTAT---
--TGATTTATGGC
 A C T G C G A T T C G A C T A G C G T A A G C T G A T C A C G T C T G A A C G T A C G T A C G T A C G T
A C G T A C G T C G A T C T A G G C T A A C G T C G A T A C G T C G T A A G C T C A T G C T A G A T G C

Hoxc9/MA0485.1/Jaspar

Match Rank:10
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:GTAGATCTAT----
-NTGATTTATGGCC
 A C T G C G A T T C G A C T A G C G T A A G C T G A T C A C G T C T G A A C G T A C G T A C G T A C G T A C G T
A C G T T C A G C G A T C T A G C G T A A C G T C G A T A C G T C T G A G A C T C A T G C T A G A T G C G A T C