Information for 21-GSCTGGAGCCCCTGAG (Motif 27)

C T A G A T C G G T A C A C G T A C T G A C T G G T C A A C T G A G T C A G T C T A G C A T G C A C G T T C A G T C G A A C T G
Reverse Opposite:
A G T C A C G T A G T C G T C A A T C G A C T G A C T G A C T G A G T C A C G T A G T C A G T C T C G A A C T G A T G C A G T C
p-value:1e-7
log p-value:-1.671e+01
Information Content per bp:1.780
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.79%
Number of Background Sequences with motif12.8
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets49.3 +/- 18.0bp
Average Position of motif in Background50.6 +/- 29.4bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL013.1_MED-1/Jaspar

Match Rank:1
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:GSCTGGAGCCCCTGAG
---CGGAGC-------
 C T A G A T C G G T A C A C G T A C T G A C T G G T C A A C T G A G T C A G T C T A G C A T G C A C G T T C A G T C G A A C T G
A C G T A C G T A C G T A T G C A C T G A C T G C G T A A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ZNF415(Zf)/HEK293-ZNF415.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--GSCTGGAGCCCCTGAG
GRTGMTRGAGCC------
 A C G T A C G T C T A G A T C G G T A C A C G T A C T G A C T G G T C A A C T G A G T C A G T C T A G C A T G C A C G T T C A G T C G A A C T G
A T C G T C G A G A C T A T C G T G A C A C G T C T A G A C T G C G T A A C T G A G T C G T A C A C G T A C G T A C G T A C G T A C G T A C G T

PB0052.1_Plagl1_1/Jaspar

Match Rank:3
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-GSCTGGAGCCCCTGAG
TTGGGGGCGCCCCTAG-
 A C G T C T A G A T C G G T A C A C G T A C T G A C T G G T C A A C T G A G T C A G T C T A G C A T G C A C G T T C A G T C G A A C T G
A C G T G A C T C T A G C T A G C A T G C T A G A C T G A T G C A T C G T G A C G A T C G T A C G A T C A C G T T C G A T A C G A C G T

POL006.1_BREu/Jaspar

Match Rank:4
Score:0.54
Offset:2
Orientation:forward strand
Alignment:GSCTGGAGCCCCTGAG
--AGCGCGCC------
 C T A G A T C G G T A C A C G T A C T G A C T G G T C A A C T G A G T C A G T C T A G C A T G C A C G T T C A G T C G A A C T G
A C G T A C G T T G C A T A C G T A G C T C A G T G A C A C T G A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T

PB0113.1_E2F3_2/Jaspar

Match Rank:5
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-GSCTGGAGCCCCTGAG
AGCTCGGCGCCAAAAGC
 A C G T C T A G A T C G G T A C A C G T A C T G A C T G G T C A A C T G A G T C A G T C T A G C A T G C A C G T T C A G T C G A A C T G
G T A C A T C G G A C T C G A T G A T C C T A G A T C G G T A C C A T G T A G C G A T C C G T A G T C A C T G A T G C A A T C G A T G C

POL011.1_XCPE1/Jaspar

Match Rank:6
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-GSCTGGAGCCCCTGAG
GGGCGGGACC-------
 A C G T C T A G A T C G G T A C A C G T A C T G A C T G G T C A A C T G A G T C A G T C T A G C A T G C A C G T T C A G T C G A A C T G
A C T G A T C G A C T G A G T C A C T G A C T G C T A G C G T A A T G C G T A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:7
Score:0.51
Offset:5
Orientation:forward strand
Alignment:GSCTGGAGCCCCTGAG
-----CAGCC------
 C T A G A T C G G T A C A C G T A C T G A C T G G T C A A C T G A G T C A G T C T A G C A T G C A C G T T C A G T C G A A C T G
A C G T A C G T A C G T A C G T A C G T T A G C C G T A A C T G A G T C A T G C A C G T A C G T A C G T A C G T A C G T A C G T

ZNF165(Zf)/WHIM12-ZNF165-ChIP-Seq(GSE65937)/Homer

Match Rank:8
Score:0.51
Offset:-1
Orientation:reverse strand
Alignment:-GSCTGGAGCCCCTGAG
TGCCTGCGYCMCCTT--
 A C G T C T A G A T C G G T A C A C G T A C T G A C T G G T C A A C T G A G T C A G T C T A G C A T G C A C G T T C A G T C G A A C T G
C A G T A C T G A G T C A G T C A C G T A C T G A T G C C T A G A G T C G A T C G T C A A G T C A G T C G C A T A C G T A C G T A C G T

LRF(Zf)/Erythroblasts-ZBTB7A-ChIP-Seq(GSE74977)/Homer

Match Rank:9
Score:0.50
Offset:5
Orientation:forward strand
Alignment:GSCTGGAGCCCCTGAG
-----AAGACCCYYN-
 C T A G A T C G G T A C A C G T A C T G A C T G G T C A A C T G A G T C A G T C T A G C A T G C A C G T T C A G T C G A A C T G
A C G T A C G T A C G T A C G T A C G T T C G A T G C A A C T G G T C A A G T C A G T C A G T C A G T C A G C T T G A C A C G T

PB0112.1_E2F2_2/Jaspar

Match Rank:10
Score:0.50
Offset:-1
Orientation:forward strand
Alignment:-GSCTGGAGCCCCTGAG
CCTTCGGCGCCAAAAGG
 A C G T C T A G A T C G G T A C A C G T A C T G A C T G G T C A A C T G A G T C A G T C T A G C A T G C A C G T T C A G T C G A A C T G
G A T C T A C G A G C T C G A T G A T C C T A G A T C G T G A C C A T G T A G C G A T C C T G A G T C A C T G A T C G A A C T G A T C G