Information for 11-GTGGCMCTSTGCA (Motif 11)

C T A G A C G T A C T G C T A G G T A C T G C A A G T C G A C T T A G C A C G T A T C G A G T C C G T A
Reverse Opposite:
A C G T A C T G A T G C C G T A A T C G C G T A A C T G A C G T C A T G G A T C A G T C C G T A G A T C
p-value:1e-12
log p-value:-2.941e+01
Information Content per bp:1.785
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.57%
Number of Background Sequences with motif30.2
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets43.7 +/- 22.0bp
Average Position of motif in Background50.9 +/- 24.7bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFIC::TLX1/MA0119.1/Jaspar

Match Rank:1
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:GTGGCMCTSTGCA-
TTGGCATGGTGCCA
 C T A G A C G T A C T G C T A G G T A C T G C A A G T C G A C T T A G C A C G T A T C G A G T C C G T A A C G T
G A C T A C G T A C T G A C T G A G T C C G T A G A C T A T C G A T C G C A G T A C T G A G T C A G T C C G T A

NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:2
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-GTGGCMCTSTGCA--
CTTGGCANNNTGCCAA
 A C G T C T A G A C G T A C T G C T A G G T A C T G C A A G T C G A C T T A G C A C G T A T C G A G T C C G T A A C G T A C G T
A G T C G A C T C A G T A C T G C T A G T G A C G C T A A T G C G C A T A T C G C G A T A C T G G A T C G T A C G T C A C T G A

PB0091.1_Zbtb3_1/Jaspar

Match Rank:3
Score:0.57
Offset:1
Orientation:forward strand
Alignment:GTGGCMCTSTGCA-----
-AATCGCACTGCATTCCG
 C T A G A C G T A C T G C T A G G T A C T G C A A G T C G A C T T A G C A C G T A T C G A G T C C G T A A C G T A C G T A C G T A C G T A C G T
A C G T C T G A C T G A A C G T A T G C A T C G G T A C C T G A A T G C C G A T A C T G A T G C G T C A A G C T A C G T A T G C A T G C A C T G

PB0044.1_Mtf1_1/Jaspar

Match Rank:4
Score:0.54
Offset:1
Orientation:forward strand
Alignment:GTGGCMCTSTGCA----
-GGGCCGTGTGCAAAAA
 C T A G A C G T A C T G C T A G G T A C T G C A A G T C G A C T T A G C A C G T A T C G A G T C C G T A A C G T A C G T A C G T A C G T
A C G T C A T G A C T G C T A G G A T C G T A C C A T G C A G T A C T G G A C T C A T G G T A C C G T A T G C A G T C A C T G A G C A T

NFIX/MA0671.1/Jaspar

Match Rank:5
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-GTGGCMCTSTGCA
NTTGGCANN-----
 A C G T C T A G A C G T A C T G C T A G G T A C T G C A A G T C G A C T T A G C A C G T A T C G A G T C C G T A
A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G A C G T A C G T A C G T A C G T A C G T

PB0113.1_E2F3_2/Jaspar

Match Rank:6
Score:0.53
Offset:-4
Orientation:reverse strand
Alignment:----GTGGCMCTSTGCA
NNNNTTGGCGCCGANNN
 A C G T A C G T A C G T A C G T C T A G A C G T A C T G C T A G G T A C T G C A A G T C G A C T T A G C A C G T A T C G A G T C C G T A
T A C G T A G C A C G T G A C T A C G T G C A T C T A G A T C G G T A C A C T G A T G C A G T C C T A G G C T A C T A G A T G C C A G T

Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:7
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:GTGGCMCTSTGCA--
-TGGCAGNCTGCCAG
 C T A G A C G T A C T G C T A G G T A C T G C A A G T C G A C T T A G C A C G T A T C G A G T C C G T A A C G T A C G T
A C G T C A G T A C T G A T C G T G A C G C T A A C T G T A G C G T A C C G A T A C T G T A G C G T A C G C T A T C A G

NFIC/MA0161.1/Jaspar

Match Rank:8
Score:0.52
Offset:0
Orientation:forward strand
Alignment:GTGGCMCTSTGCA
TTGGCA-------
 C T A G A C G T A C T G C T A G G T A C T G C A A G T C G A C T T A G C A C G T A T C G A G T C C G T A
G A C T C A G T T C A G C T A G G T A C C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0153.1_Nr2f2_2/Jaspar

Match Rank:9
Score:0.51
Offset:-3
Orientation:reverse strand
Alignment:---GTGGCMCTSTGCA
NNNNTGACCCGGCGCG
 A C G T A C G T A C G T C T A G A C G T A C T G C T A G G T A C T G C A A G T C G A C T T A G C A C G T A T C G A G T C C G T A
C G A T T C G A T A G C A T C G A G C T T C A G G T C A G T A C G T A C A G T C T A C G T C A G G T A C A C T G G T A C A C T G

Hic1/MA0739.1/Jaspar

Match Rank:10
Score:0.51
Offset:-2
Orientation:reverse strand
Alignment:--GTGGCMCTSTGCA
GGTTGGCAT------
 A C G T A C G T C T A G A C G T A C T G C T A G G T A C T G C A A G T C G A C T T A G C A C G T A T C G A G T C C G T A
T C A G T A C G A G C T C A G T C A T G A T C G A G T C T C G A A G C T A C G T A C G T A C G T A C G T A C G T A C G T