Information for 6-YGKGGCAGCTCDK (Motif 7)

G A C T A C T G C A G T A T C G C T A G A T G C C G T A A T C G A T G C A G C T A G T C C A G T A C G T
Reverse Opposite:
T G C A G A C T C T A G C T G A A T C G T A G C C G A T A T C G A G T C T A G C G T C A T G A C C T G A
p-value:1e-11
log p-value:-2.653e+01
Information Content per bp:1.667
Number of Target Sequences with motif23.0
Percentage of Target Sequences with motif2.95%
Number of Background Sequences with motif214.4
Percentage of Background Sequences with motif0.45%
Average Position of motif in Targets49.5 +/- 23.7bp
Average Position of motif in Background50.0 +/- 27.3bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL010.1_DCE_S_III/Jaspar

Match Rank:1
Score:0.64
Offset:5
Orientation:forward strand
Alignment:YGKGGCAGCTCDK
-----CAGCC---
 G A C T A C T G C A G T A T C G C T A G A T G C C G T A A T C G A T G C A G C T A G T C C A G T A C G T
A C G T A C G T A C G T A C G T A C G T T A G C C G T A A C T G A G T C A T G C A C G T A C G T A C G T

PB0003.1_Ascl2_1/Jaspar

Match Rank:2
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-YGKGGCAGCTCDK---
NNNNAGCAGCTGCTGAN
 A C G T G A C T A C T G C A G T A T C G C T A G A T G C C G T A A T C G A T G C A G C T A G T C C A G T A C G T A C G T A C G T A C G T
G T A C C G T A C T A G A C G T T C G A T C A G A G T C C G T A A T C G T A G C C G A T A C T G A G T C A G C T T C A G T G C A T C A G

Ascl2/MA0816.1/Jaspar

Match Rank:3
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:YGKGGCAGCTCDK
---AGCAGCTGCT
 G A C T A C T G C A G T A T C G C T A G A T G C C G T A A T C G A T G C A G C T A G T C C A G T A C G T
A C G T A C G T A C G T C T G A T C A G T G A C C G T A A C T G T A G C C G A T C A T G A G T C A G C T

PH0169.1_Tgif1/Jaspar

Match Rank:4
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---YGKGGCAGCTCDK-
GATATTGACAGCTGCGT
 A C G T A C G T A C G T G A C T A C T G C A G T A T C G C T A G A T G C C G T A A T C G A T G C A G C T A G T C C A G T A C G T A C G T
C A G T C T G A A C G T C G T A C G A T C G A T A C T G C G T A A G T C C T G A C T A G A T G C A C G T T A C G T A G C A C T G C G A T

POL009.1_DCE_S_II/Jaspar

Match Rank:5
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:YGKGGCAGCTCDK
---CACAGN----
 G A C T A C T G C A G T A T C G C T A G A T G C C G T A A T C G A T G C A G C T A G T C C A G T A C G T
A C G T A C G T A C G T T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T A C G T A C G T

PH0170.1_Tgif2/Jaspar

Match Rank:6
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--YGKGGCAGCTCDK-
GTATTGACAGCTNNTT
 A C G T A C G T G A C T A C T G C A G T A T C G C T A G A T G C C G T A A T C G A T G C A G C T A G T C C A G T A C G T A C G T
A C T G A C G T C G T A C G A T C G A T A C T G C G T A A G T C C T G A C A T G T A G C G A C T T C G A T A C G G C A T C G A T

NHLH1/MA0048.2/Jaspar

Match Rank:7
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:YGKGGCAGCTCDK
---CGCAGCTGCG
 G A C T A C T G C A G T A T C G C T A G A T G C C G T A A T C G A T G C A G C T A G T C C A G T A C G T
A C G T A C G T A C G T T G A C C T A G A T G C T C G A A T C G T A G C A C G T A C T G A G T C A C T G

Myog/MA0500.1/Jaspar

Match Rank:8
Score:0.62
Offset:3
Orientation:forward strand
Alignment:YGKGGCAGCTCDK-
---GACAGCTGCAG
 G A C T A C T G C A G T A T C G C T A G A T G C C G T A A T C G A T G C A G C T A G T C C A G T A C G T A C G T
A C G T A C G T A C G T T C A G T C G A A G T C C G T A A C T G T A G C A C G T A C T G T A G C C T G A T A C G

E2A(bHLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer

Match Rank:9
Score:0.62
Offset:4
Orientation:reverse strand
Alignment:YGKGGCAGCTCDK-
----GCAGCTGTNN
 G A C T A C T G C A G T A T C G C T A G A T G C C G T A A T C G A T G C A G C T A G T C C A G T A C G T A C G T
A C G T A C G T A C G T A C G T T C A G A G T C C G T A A T C G T A G C A C G T A C T G A G C T A C T G G C A T

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:10
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:YGKGGCAGCTCDK
-NNAGCAGCTGCT
 G A C T A C T G C A G T A T C G C T A G A T G C C G T A A T C G A T G C A G C T A G T C C A G T A C G T
A C G T T C A G T A G C C T G A T C A G A G T C C G T A A T C G A T G C C G A T A C T G A G T C G A C T