Information for 5-TGACCTGGCCCCT (Motif 6)

A C G T A C T G C G T A A G T C A G T C C G A T A C T G A C T G G T A C G T A C A T G C A G T C A C G T
Reverse Opposite:
C G T A A C T G A T C G A C T G A C T G A G T C A G T C C G T A A C T G A C T G C G A T A G T C C G T A
p-value:1e-11
log p-value:-2.719e+01
Information Content per bp:1.903
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.77%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets66.7 +/- 13.7bp
Average Position of motif in Background63.4 +/- 16.8bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:1
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:TGACCTGGCCCCT
TGACCT-------
 A C G T A C T G C G T A A G T C A G T C C G A T A C T G A C T G G T A C G T A C A T G C A G T C A C G T
A C G T C A T G G C T A G T A C G T A C G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:2
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:TGACCTGGCCCCT
TGACCTYA-----
 A C G T A C T G C G T A A G T C A G T C C G A T A C T G A C T G G T A C G T A C A T G C A G T C A C G T
A G C T C T A G G C T A T G A C A T G C A G C T A G T C C G T A A C G T A C G T A C G T A C G T A C G T

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:3
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:TGACCTGGCCCCT-
TGACCTTTGCCCTA
 A C G T A C T G C G T A A G T C A G T C C G A T A C T G A C T G G T A C G T A C A T G C A G T C A C G T A C G T
A G C T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G T G A C G A T C G A T C G A C T T C G A

CREB3/MA0638.1/Jaspar

Match Rank:4
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---TGACCTGGCCCCT
NGATGACGTGGCAN--
 A C G T A C G T A C G T A C G T A C T G C G T A A G T C A G T C C G A T A C T G A C T G G T A C G T A C A T G C A G T C A C G T
A G C T C A T G T C G A G A C T A C T G C G T A G A T C A C T G C G A T A T C G C A T G G T A C T C G A A G T C A C G T A C G T

PB0153.1_Nr2f2_2/Jaspar

Match Rank:5
Score:0.64
Offset:-4
Orientation:reverse strand
Alignment:----TGACCTGGCCCCT
NNNNTGACCCGGCGCG-
 A C G T A C G T A C G T A C G T A C G T A C T G C G T A A G T C A G T C C G A T A C T G A C T G G T A C G T A C A T G C A G T C A C G T
C G A T T C G A T A G C A T C G A G C T T C A G G T C A G T A C G T A C A G T C T A C G T C A G G T A C A C T G G T A C A C T G A C G T

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:6
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-TGACCTGGCCCCT
NTGACCTTGA----
 A C G T A C G T A C T G C G T A A G T C A G T C C G A T A C T G A C T G G T A C G T A C A T G C A G T C A C G T
C A T G A G C T T A C G G T C A G T A C T A G C A G C T G A C T A T C G T C G A A C G T A C G T A C G T A C G T

RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer

Match Rank:7
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:TGACCTGGCCCCT
TGACCTTGACCT-
 A C G T A C T G C G T A A G T C A G T C C G A T A C T G A C T G G T A C G T A C A T G C A G T C A C G T
G A C T T C A G T G C A A G T C A G T C G A C T A C G T T A C G C G T A G T A C G A T C G A C T A C G T

CREB3L1/MA0839.1/Jaspar

Match Rank:8
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---TGACCTGGCCCCT
TGATGACGTGGCAN--
 A C G T A C G T A C G T A C G T A C T G C G T A A G T C A G T C C G A T A C T G A C T G G T A C G T A C A T G C A G T C A C G T
G A C T C T A G T C G A G A C T A C T G G C T A A G T C A T C G A G C T C T A G C A T G G A T C C T G A A G C T A C G T A C G T

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:9
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:TGACCTGGCCCCT
TGACCTTGAV---
 A C G T A C T G C G T A A G T C A G T C C G A T A C T G A C T G G T A C G T A C A T G C A G T C A C G T
G C A T C T A G C T G A G A T C G T A C G A C T G A C T A T C G C T G A T G C A A C G T A C G T A C G T

Nr5a2/MA0505.1/Jaspar

Match Rank:10
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--TGACCTGGCCCCT
GCTGACCTTGAACTN
 A C G T A C G T A C G T A C T G C G T A A G T C A G T C C G A T A C T G A C T G G T A C G T A C A T G C A G T C A C G T
T A C G T G A C G C A T T C A G C T G A A G T C A G T C A G C T C A G T A T C G C T G A T C G A G A T C G A C T A G C T