Information for 2-GACAMCTKCTYAM (Motif 3)

A C T G C G T A A G T C C G T A G T C A A G T C A C G T A C T G A G T C A C G T A G T C G T C A G T A C
Reverse Opposite:
A C T G A C G T C T A G C G T A A C T G G T A C C G T A A C T G A C G T A C G T A C T G A C G T A G T C
p-value:1e-13
log p-value:-3.134e+01
Information Content per bp:1.878
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.77%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets60.0 +/- 23.5bp
Average Position of motif in Background38.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0047.1_Myf6_1/Jaspar

Match Rank:1
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--GACAMCTKCTYAM-
CNGACACCTGTTCNNN
 A C G T A C G T A C T G C G T A A G T C C G T A G T C A A G T C A C G T A C T G A G T C A C G T A G T C G T C A G T A C A C G T
T G A C C T A G T C A G T G C A A G T C C T G A T G A C A T G C C G A T C T A G A G C T A G C T T A G C G A C T A G C T A G T C

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:2
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-GACAMCTKCTYAM
SNGCACCTGCHS--
 A C G T A C T G C G T A A G T C C G T A G T C A A G T C A C G T A C T G A G T C A C G T A G T C G T C A G T A C
T A C G C T A G T A C G A G T C C G T A A G T C A G T C A C G T A C T G A G T C G A T C T A G C A C G T A C G T

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:3
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-GACAMCTKCTYAM
TGACACCT------
 A C G T A C T G C G T A A G T C C G T A G T C A A G T C A C G T A C T G A G T C A C G T A G T C G T C A G T A C
G A C T T C A G C T G A A G T C C T G A T A G C G A T C G A C T A C G T A C G T A C G T A C G T A C G T A C G T

ID4/MA0824.1/Jaspar

Match Rank:4
Score:0.63
Offset:0
Orientation:forward strand
Alignment:GACAMCTKCTYAM
TACACCTGTC---
 A C T G C G T A A G T C C G T A G T C A A G T C A C G T A C T G A G T C A C G T A G T C G T C A G T A C
C A G T T C G A A G T C C T G A A T G C T A G C C G A T T C A G A G C T G A T C A C G T A C G T A C G T

PB0117.1_Eomes_2/Jaspar

Match Rank:5
Score:0.63
Offset:-5
Orientation:reverse strand
Alignment:-----GACAMCTKCTYAM
NNGGCGACACCTCNNN--
 A C G T A C G T A C G T A C G T A C G T A C T G C G T A A G T C C G T A G T C A A G T C A C G T A C T G A G T C A C G T A G T C G T C A G T A C
A T C G T C G A T C A G A T C G T G A C C T A G G C T A A G T C C T G A A T G C A G T C G A C T G A T C A G T C T A C G A G T C A C G T A C G T

TCF3/MA0522.2/Jaspar

Match Rank:6
Score:0.63
Offset:0
Orientation:forward strand
Alignment:GACAMCTKCTYAM
AACACCTGCT---
 A C T G C G T A A G T C C G T A G T C A A G T C A C G T A C T G A G T C A C G T A G T C G T C A G T A C
G T C A T C G A A G T C G C T A A T G C A T G C G C A T T C A G A G T C C A G T A C G T A C G T A C G T

SNAI2/MA0745.1/Jaspar

Match Rank:7
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:GACAMCTKCTYAM
-NCACCTGTN---
 A C T G C G T A A G T C C G T A G T C A A G T C A C G T A C T G A G T C A C G T A G T C G T C A G T A C
A C G T T C G A G T A C C T G A G A T C G A T C C G A T C A T G G A C T G A C T A C G T A C G T A C G T

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:8
Score:0.63
Offset:0
Orientation:forward strand
Alignment:GACAMCTKCTYAM
NNCACCTGNN---
 A C T G C G T A A G T C C G T A G T C A A G T C A C G T A C T G A G T C A C G T A G T C G T C A G T A C
A T G C T G C A A G T C C G T A A G T C A G T C A C G T A C T G A T G C G T C A A C G T A C G T A C G T

Ascl2/MA0816.1/Jaspar

Match Rank:9
Score:0.61
Offset:0
Orientation:forward strand
Alignment:GACAMCTKCTYAM
AGCAGCTGCT---
 A C T G C G T A A G T C C G T A G T C A A G T C A C G T A C T G A G T C A C G T A G T C G T C A G T A C
T C G A T C A G G T A C C G T A A T C G T G A C C G A T A C T G A G T C G A C T A C G T A C G T A C G T

E2A(bHLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer

Match Rank:10
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-GACAMCTKCTYAM
NNACAGCTGC----
 A C G T A C T G C G T A A G T C C G T A G T C A A G T C A C G T A C T G A G T C A C G T A G T C G T C A G T A C
C G T A T G A C T C G A A G T C C G T A A T C G A T G C A C G T A C T G A G T C A C G T A C G T A C G T A C G T