Information for 6-CCGACCTTCT (Motif 29)

A G T C A G T C A C T G C G T A A G T C A G T C A C G T A C G T A G T C A C G T
Reverse Opposite:
T G C A A C T G C G T A C G T A C T A G A C T G A C G T A G T C A C T G A C T G
p-value:1e-8
log p-value:-2.033e+01
Information Content per bp:1.923
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.03%
Number of Background Sequences with motif19.7
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets59.9 +/- 22.8bp
Average Position of motif in Background50.2 +/- 26.1bp
Strand Bias (log2 ratio + to - strand density)-1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Esrrg/MA0643.1/Jaspar

Match Rank:1
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:CCGACCTTCT
ATGACCTTGA
 A G T C A G T C A C T G C G T A A G T C A G T C A C G T A C G T A G T C A C G T
C G T A G A C T T C A G G T C A T A G C G T A C A G C T G A C T A T C G C T G A

PB0161.1_Rxra_2/Jaspar

Match Rank:2
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---CCGACCTTCT---
NNNNCAACCTTCGNGA
 A C G T A C G T A C G T A G T C A G T C A C T G C G T A A G T C A G T C A C G T A C G T A G T C A C G T A C G T A C G T A C G T
G T C A C A T G G C A T C T G A A G T C T C G A T G C A T G A C G A T C C G A T C G A T A G T C C A T G A G T C A C T G G T C A

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:3
Score:0.62
Offset:0
Orientation:forward strand
Alignment:CCGACCTTCT
NTGACCTTGA
 A G T C A G T C A C T G C G T A A G T C A G T C A C G T A C G T A G T C A C G T
C A T G A G C T T A C G G T C A G T A C T A G C A G C T G A C T A T C G T C G A

PB0014.1_Esrra_1/Jaspar

Match Rank:4
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----CCGACCTTCT---
NNNNATGACCTTGANTN
 A C G T A C G T A C G T A C G T A G T C A G T C A C T G C G T A A G T C A G T C A C G T A C G T A G T C A C G T A C G T A C G T A C G T
C A G T G T A C T C A G A G T C C G T A A G C T T C A G G C T A G A T C G T A C A G C T G A C T A T C G T C G A G T C A C A G T G T C A

PB0136.1_IRC900814_2/Jaspar

Match Rank:5
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----CCGACCTTCT--
TTTTACGACTTTCCAT
 A C G T A C G T A C G T A C G T A G T C A G T C A C T G C G T A A G T C A G T C A C G T A C G T A G T C A C G T A C G T A C G T
C G A T A G C T G C A T A G C T T C G A G A T C C T A G C T G A G T A C C A G T A G C T G A C T G A T C T G A C T C G A G A C T

POL008.1_DCE_S_I/Jaspar

Match Rank:6
Score:0.58
Offset:4
Orientation:forward strand
Alignment:CCGACCTTCT
----GCTTCC
 A G T C A G T C A C T G C G T A A G T C A G T C A C G T A C G T A G T C A C G T
A C G T A C G T A C G T A C G T A C T G A T G C A G C T A C G T A T G C A T G C

NR4A2/MA0160.1/Jaspar

Match Rank:7
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:CCGACCTTCT
GTGACCTT--
 A G T C A G T C A C T G C G T A A G T C A G T C A C G T A C G T A G T C A C G T
A C T G A C G T C T A G C G T A A G T C G T A C A G C T A G C T A C G T A C G T

RORA/MA0071.1/Jaspar

Match Rank:8
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:CCGACCTTCT-
-TGACCTTGAT
 A G T C A G T C A C T G C G T A A G T C A G T C A C G T A C G T A G T C A C G T A C G T
A C G T A C G T A C T G C G T A A G T C A G T C A G C T G C A T A C T G C G T A G C A T

PB0049.1_Nr2f2_1/Jaspar

Match Rank:9
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---CCGACCTTCT---
NNNNTGACCTTTNNNN
 A C G T A C G T A C G T A G T C A G T C A C T G C G T A A G T C A G T C A C G T A C G T A G T C A C G T A C G T A C G T A C G T
A G T C C G A T A T G C C A T G A G C T T C A G G T C A G T A C G T A C A G C T A G C T G C A T C A T G T C G A C A T G G T C A

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:10
Score:0.57
Offset:1
Orientation:forward strand
Alignment:CCGACCTTCT---
-TGACCTTTNCNT
 A G T C A G T C A C T G C G T A A G T C A G T C A C G T A C G T A G T C A C G T A C G T A C G T A C G T
A C G T A C G T C T A G C G T A A G T C G T A C A C G T A C G T A C G T G T C A G T A C T G A C G A C T