Information for 11-AATGCGTGAAAGA (Motif 22)

G C T A G T C A A C G T A C T G T A G C A C T G A C G T A C T G G T C A C G T A C T G A A C T G G C T A
Reverse Opposite:
C A G T A G T C A G C T A C G T A C G T A G T C G T C A A G T C A T C G A G T C C G T A A C G T C A G T
p-value:1e-9
log p-value:-2.197e+01
Information Content per bp:1.822
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.64%
Number of Background Sequences with motif2.4
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets74.0 +/- 20.6bp
Average Position of motif in Background40.7 +/- 19.1bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Pax6/MA0069.1/Jaspar

Match Rank:1
Score:0.68
Offset:-4
Orientation:reverse strand
Alignment:----AATGCGTGAAAGA
AANTCATGCGTGAA---
 A C G T A C G T A C G T A C G T G C T A G T C A A C G T A C T G T A G C A C T G A C G T A C T G G T C A C G T A C T G A A C T G G C T A
G T C A T C G A A G T C G A C T A T G C C T G A C G A T A T C G G A T C C T A G A C G T C T A G C G T A T C G A A C G T A C G T A C G T

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:2
Score:0.67
Offset:2
Orientation:forward strand
Alignment:AATGCGTGAAAGA
--TGCGTG-----
 G C T A G T C A A C G T A C T G T A G C A C T G A C G T A C T G G T C A C G T A C T G A A C T G G C T A
A C G T A C G T G A C T A C T G A G T C A C T G A C G T A C T G A C G T A C G T A C G T A C G T A C G T

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:3
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:AATGCGTGAAAGA
-TTGCGTGCVA--
 G C T A G T C A A C G T A C T G T A G C A C T G A C G T A C T G G T C A C G T A C T G A A C T G G C T A
A C G T A C G T C A G T A C T G A G T C T C A G C G A T C A T G G T A C T A G C C G T A A C G T A C G T

TBR1/MA0802.1/Jaspar

Match Rank:4
Score:0.65
Offset:1
Orientation:forward strand
Alignment:AATGCGTGAAAGA
-AGGTGTGAAA--
 G C T A G T C A A C G T A C T G T A G C A C T G A C G T A C T G G T C A C G T A C T G A A C T G G C T A
A C G T C T G A C T A G A T C G A G C T A T C G G A C T A C T G C T G A G C T A G C T A A C G T A C G T

GCM2/MA0767.1/Jaspar

Match Rank:5
Score:0.65
Offset:0
Orientation:forward strand
Alignment:AATGCGTGAAAGA
TATGCGGGTA---
 G C T A G T C A A C G T A C T G T A G C A C T G A C G T A C T G G T C A C G T A C T G A A C T G G C T A
A C G T T C G A A G C T T C A G A T G C C A T G A C T G C T A G G A C T C T G A A C G T A C G T A C G T

E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.63
Offset:2
Orientation:forward strand
Alignment:AATGCGTGAAAGA
--GGCGGGAARN-
 G C T A G T C A A C G T A C T G T A G C A C T G A C G T A C T G G T C A C G T A C T G A A C T G G C T A
A C G T A C G T T A C G T A C G G T A C A T C G A C T G T A C G T C G A C T G A T C G A A T C G A C G T

TBX21/MA0690.1/Jaspar

Match Rank:7
Score:0.63
Offset:0
Orientation:forward strand
Alignment:AATGCGTGAAAGA
AAGGTGTGAA---
 G C T A G T C A A C G T A C T G T A G C A C T G A C G T A C T G G T C A C G T A C T G A A C T G G C T A
C T G A C T G A C T A G A C T G A G C T C A T G G A C T A C T G C T G A G C T A A C G T A C G T A C G T

PB0024.1_Gcm1_1/Jaspar

Match Rank:8
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---AATGCGTGAAAGA
NNNNATGCGGGTNNNN
 A C G T A C G T A C G T G C T A G T C A A C G T A C T G T A G C A C T G A C G T A C T G G T C A C G T A C T G A A C T G G C T A
G T C A C T G A G C A T A C T G T C G A G A C T T C A G A T G C C A T G A C T G A C T G A G C T C G T A A G T C A C T G C G T A

EOMES/MA0800.1/Jaspar

Match Rank:9
Score:0.62
Offset:0
Orientation:forward strand
Alignment:AATGCGTGAAAGA
AAGGTGTGAAAAT
 G C T A G T C A A C G T A C T G T A G C A C T G A C G T A C T G G T C A C G T A C T G A A C T G G C T A
C T G A C T G A C T A G A C T G A G C T T C A G G A C T A C T G T C G A G C T A G T C A C G T A G A C T

Tbr1(T-box)/Cortex-Tbr1-ChIP-Seq(GSE71384)/Homer

Match Rank:10
Score:0.61
Offset:0
Orientation:forward strand
Alignment:AATGCGTGAAAGA
AAGGTGTKAA---
 G C T A G T C A A C G T A C T G T A G C A C T G A C G T A C T G G T C A C G T A C T G A A C T G G C T A
C T G A C T G A C A T G A T C G A G C T A T C G G A C T C A T G C T G A G T C A A C G T A C G T A C G T