Information for 4-GGAACAATGT (Motif 21)

A C T G A C T G G T C A C T G A G A T C G T C A T C G A A C G T A C T G A G C T
Reverse Opposite:
C T G A T G A C G T C A A G C T C A G T C T A G A G C T A C G T G T A C G T A C
p-value:1e-9
log p-value:-2.214e+01
Information Content per bp:1.685
Number of Target Sequences with motif24.0
Percentage of Target Sequences with motif3.08%
Number of Background Sequences with motif293.8
Percentage of Background Sequences with motif0.61%
Average Position of motif in Targets55.0 +/- 27.8bp
Average Position of motif in Background48.5 +/- 28.2bp
Strand Bias (log2 ratio + to - strand density)0.9
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

DMRT1(DM)/Testis-DMRT1-ChIP-Seq(GSE64892)/Homer

Match Rank:1
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--GGAACAATGT---
TWGHWACAWTGTWDC
 A C G T A C G T A C T G A C T G G T C A C T G A G A T C G T C A T C G A A C G T A C T G A G C T A C G T A C G T A C G T
G C A T C G A T C T A G G C T A G C A T C G T A G A T C G C T A C G A T C G A T C T A G C G A T C G T A C G A T G A T C

PB0063.1_Sox13_1/Jaspar

Match Rank:2
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---GGAACAATGT---
TTAAGAACAATAAATT
 A C G T A C G T A C G T A C T G A C T G G T C A C T G A G A T C G T C A T C G A A C G T A C T G A G C T A C G T A C G T A C G T
C G A T G A C T C G T A C T G A C A T G C T G A C G T A G A T C C G T A C T G A G C A T C G T A C G T A C G A T G C A T G C A T

DMRT6(DM)/Testis-DMRT6-ChIP-Seq(GSE60440)/Homer

Match Rank:3
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:GGAACAATGT-----
GHTACAWTGTADCHR
 A C T G A C T G G T C A C T G A G A T C G T C A T C G A A C G T A C T G A G C T A C G T A C G T A C G T A C G T A C G T
C T A G G T C A G C A T C G T A A T G C G C T A C G T A C G A T T C A G G C A T C G T A C G A T G T A C G C T A C T G A

SPIB/MA0081.1/Jaspar

Match Rank:4
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---GGAACAATGT
AGAGGAA------
 A C G T A C G T A C G T A C T G A C T G G T C A C T G A G A T C G T C A T C G A A C G T A C T G A G C T
C G T A T A C G T G C A C T A G C A T G C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T

Sox5/MA0087.1/Jaspar

Match Rank:5
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:GGAACAATGT
-NAACAAT--
 A C T G A C T G G T C A C T G A G A T C G T C A T C G A A C G T A C T G A G C T
A C G T G C A T C G T A C T G A A G T C C G T A G T C A A C G T A C G T A C G T

NFATC1/MA0624.1/Jaspar

Match Rank:6
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---GGAACAATGT
NNTGGAAANN---
 A C G T A C G T A C G T A C T G A C T G G T C A C T G A G A T C G T C A T C G A A C G T A C T G A G C T
C G T A C T G A G A C T C T A G A C T G C T G A C T G A G C T A C G T A G C A T A C G T A C G T A C G T

PB0072.1_Sox5_1/Jaspar

Match Rank:7
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---GGAACAATGT---
TTTAGAACAATAAAAT
 A C G T A C G T A C G T A C T G A C T G G T C A C T G A G A T C G T C A T C G A A C G T A C T G A G C T A C G T A C G T A C G T
C G A T G C A T C A G T C T G A C T A G T C G A C G T A A G T C C G T A C G T A G C A T C G T A C T G A C G T A G C T A C G A T

PB0173.1_Sox21_2/Jaspar

Match Rank:8
Score:0.64
Offset:-4
Orientation:reverse strand
Alignment:----GGAACAATGT---
NNNNNGAACAATTGANN
 A C G T A C G T A C G T A C G T A C T G A C T G G T C A C T G A G A T C G T C A T C G A A C G T A C T G A G C T A C G T A C G T A C G T
A G C T G T C A C T A G G T A C A C T G T A C G T C G A C G T A A T G C C G T A T C G A G C A T C G A T T A C G T C G A A G C T A C G T

PB0070.1_Sox30_1/Jaspar

Match Rank:9
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--GGAACAATGT----
AATGAACAATGGAATT
 A C G T A C G T A C T G A C T G G T C A C T G A G A T C G T C A T C G A A C G T A C T G A G C T A C G T A C G T A C G T A C G T
C T G A G C A T C A G T A T C G T C G A C G T A A G T C G C T A C T G A C G A T C A T G T C A G G C T A G T C A G A C T G A C T

NFATC3/MA0625.1/Jaspar

Match Rank:10
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---GGAACAATGT
AATGGAAAAT---
 A C G T A C G T A C G T A C T G A C T G G T C A C T G A G A T C G T C A T C G A A C G T A C T G A G C T
C G T A C T G A G A C T T A C G C A T G T C G A C G T A G C T A C T G A G C A T A C G T A C G T A C G T