Information for 2-CTGCYTASVT (Motif 17)

A G T C C G A T A T C G T G A C G A T C A G C T C T G A A T C G T A C G A G C T
Reverse Opposite:
C T G A A T G C T A G C G A C T T C G A C T A G A C T G T A G C C G T A A C T G
p-value:1e-9
log p-value:-2.281e+01
Information Content per bp:1.598
Number of Target Sequences with motif110.0
Percentage of Target Sequences with motif14.10%
Number of Background Sequences with motif3578.9
Percentage of Background Sequences with motif7.44%
Average Position of motif in Targets49.0 +/- 26.3bp
Average Position of motif in Background49.7 +/- 29.7bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL009.1_DCE_S_II/Jaspar

Match Rank:1
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-CTGCYTASVT
GCTGTG-----
 A C G T A G T C C G A T A T C G T G A C G A T C A G C T C T G A A T C G T A C G A G C T
T A C G T A G C C A G T A T C G G A C T A T C G A C G T A C G T A C G T A C G T A C G T

POL008.1_DCE_S_I/Jaspar

Match Rank:2
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-CTGCYTASVT
GCTTCC-----
 A C G T A G T C C G A T A T C G T G A C G A T C A G C T C T G A A T C G T A C G A G C T
A C T G A T G C A G C T A C G T A T G C A T G C A C G T A C G T A C G T A C G T A C G T

PB0091.1_Zbtb3_1/Jaspar

Match Rank:3
Score:0.54
Offset:-7
Orientation:forward strand
Alignment:-------CTGCYTASVT
AATCGCACTGCATTCCG
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G A T A T C G T G A C G A T C A G C T C T G A A T C G T A C G A G C T
C T G A C T G A A C G T A T G C A T C G G T A C C T G A A T G C C G A T A C T G A T G C G T C A A G C T A C G T A T G C A T G C A C T G

SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer

Match Rank:4
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--CTGCYTASVT
ANCAGCTG----
 A C G T A C G T A G T C C G A T A T C G T G A C G A T C A G C T C T G A A T C G T A C G A G C T
C T G A T C A G G T A C G C T A A C T G T G A C G C A T C A T G A C G T A C G T A C G T A C G T

DUXA/MA0884.1/Jaspar

Match Rank:5
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:CTGCYTASVT---
NTGATTAAATTAN
 A G T C C G A T A T C G T G A C G A T C A G C T C T G A A T C G T A C G A G C T A C G T A C G T A C G T
G A C T G C A T T C A G T G C A A G C T A C G T T C G A T C G A C T G A A G C T G A C T C T G A C T A G

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:CTGCYTASVT-
-TGCCCAGNHW
 A G T C C G A T A T C G T G A C G A T C A G C T C T G A A T C G T A C G A G C T A C G T
A C G T C G A T C A T G A G T C G A T C G T A C G C T A C T A G C A T G G A T C C G T A

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:7
Score:0.52
Offset:-4
Orientation:reverse strand
Alignment:----CTGCYTASVT
CCCCCTGCTGTG--
 A C G T A C G T A C G T A C G T A G T C C G A T A T C G T G A C G A T C A G C T C T G A A T C G T A C G A G C T
G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G A C G T A C G T

Ascl2/MA0816.1/Jaspar

Match Rank:8
Score:0.50
Offset:-5
Orientation:forward strand
Alignment:-----CTGCYTASVT
AGCAGCTGCT-----
 A C G T A C G T A C G T A C G T A C G T A G T C C G A T A T C G T G A C G A T C A G C T C T G A A T C G T A C G A G C T
T C G A T C A G G T A C C G T A A T C G T G A C C G A T A C T G A G T C G A C T A C G T A C G T A C G T A C G T A C G T

Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan_et_al.)/Homer

Match Rank:9
Score:0.50
Offset:0
Orientation:forward strand
Alignment:CTGCYTASVT
CTGTTTAC--
 A G T C C G A T A T C G T G A C G A T C A G C T C T G A A T C G T A C G A G C T
A G T C A C G T A C T G A G C T A C G T A C G T G T C A A G T C A C G T A C G T

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:10
Score:0.50
Offset:-6
Orientation:forward strand
Alignment:------CTGCYTASVT
SNGCACCTGCHS----
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G A T A T C G T G A C G A T C A G C T C T G A A T C G T A C G A G C T
T A C G C T A G T A C G A G T C C G T A A G T C A G T C A C G T A C T G A G T C G A T C T A G C A C G T A C G T A C G T A C G T