Information for 5-CTWGTTYACAATCACA (Motif 12)

A G T C C G A T C G A T C A T G G A C T C A G T A G C T C G T A G T A C C G T A G T C A G C A T G T A C C T G A A G T C C G T A
Reverse Opposite:
A C G T A C T G A G C T A C T G C G T A A C G T A C G T A C T G A C G T C T G A G T C A C G T A G A T C G C T A C G T A C T A G
p-value:1e-11
log p-value:-2.542e+01
Information Content per bp:1.723
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.64%
Number of Background Sequences with motif1.4
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets29.2 +/- 12.8bp
Average Position of motif in Background45.5 +/- 22.8bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.20
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0122.1_Foxk1_2/Jaspar

Match Rank:1
Score:0.66
Offset:4
Orientation:forward strand
Alignment:CTWGTTYACAATCACA---
----CAAACAACAACACCT
 A G T C C G A T C G A T C A T G G A C T C A G T A G C T C G T A G T A C C G T A G T C A G C A T G T A C C T G A A G T C C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G T A C G C T A G T C A C T G A G A T C T G C A T C G A A G T C T C G A C G T A G A T C C G T A G A T C G T A C G A C T

SRY/MA0084.1/Jaspar

Match Rank:2
Score:0.63
Offset:3
Orientation:forward strand
Alignment:CTWGTTYACAATCACA
---GTAAACAAT----
 A G T C C G A T C G A T C A T G G A C T C A G T A G C T C G T A G T A C C G T A G T C A G C A T G T A C C T G A A G T C C G T A
A C G T A C G T A C G T A C T G C G A T C G T A C G T A C G T A A G T C C G T A C T G A C G A T A C G T A C G T A C G T A C G T

PB0172.1_Sox1_2/Jaspar

Match Rank:3
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:CTWGTTYACAATCACA-
--NNNTAACAATTATAN
 A G T C C G A T C G A T C A T G G A C T C A G T A G C T C G T A G T A C C G T A G T C A G C A T G T A C C T G A A G T C C G T A A C G T
A C G T A C G T A T G C T C A G G T A C A C G T T G C A T G C A A T G C C T G A C T G A G A C T C G A T C T G A G A C T C T G A C A T G

Sox1/MA0870.1/Jaspar

Match Rank:4
Score:0.59
Offset:6
Orientation:forward strand
Alignment:CTWGTTYACAATCACA-----
------AACAATAACATTGTT
 A G T C C G A T C G A T C A T G G A C T C A G T A G C T C G T A G T A C C G T A G T C A G C A T G T A C C T G A A G T C C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T G C A G C T A A G T C G T C A G T C A C G A T C G T A T C G A A T G C C G T A A C G T A G C T A C T G G A C T A G C T

MF0011.1_HMG_class/Jaspar

Match Rank:5
Score:0.58
Offset:6
Orientation:reverse strand
Alignment:CTWGTTYACAATCACA
------AACAAT----
 A G T C C G A T C G A T C A T G G A C T C A G T A G C T C G T A G T A C C G T A G T C A G C A T G T A C C T G A A G T C C G T A
A C G T A C G T A C G T A C G T A C G T A C G T T C G A C G T A G A T C C T G A T G C A C G A T A C G T A C G T A C G T A C G T

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:6
Score:0.58
Offset:8
Orientation:forward strand
Alignment:CTWGTTYACAATCACA--
--------AAACCACANN
 A G T C C G A T C G A T C A T G G A C T C A G T A G C T C G T A G T A C C G T A G T C A G C A T G T A C C T G A A G T C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C T A C T G A T C G A A G T C A G T C C T G A A G T C G T C A C T G A T G C A

PB0062.1_Sox12_1/Jaspar

Match Rank:7
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:CTWGTTYACAATCACA
NTTNAGAACAATTA--
 A G T C C G A T C G A T C A T G G A C T C A G T A G C T C G T A G T A C C G T A G T C A G C A T G T A C C T G A A G T C C G T A
C A T G C G A T C G A T C A G T C G T A A C T G C T G A G C T A A G T C G C T A C G T A G C A T C G A T C T G A A C G T A C G T

Foxk1/MA0852.1/Jaspar

Match Rank:8
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---CTWGTTYACAATCACA
NNNTTTGTTTACATTTN--
 A C G T A C G T A C G T A G T C C G A T C G A T C A T G G A C T C A G T A G C T C G T A G T A C C G T A G T C A G C A T G T A C C T G A A G T C C G T A
T A G C A G C T A T C G G C A T C G A T A C G T C T A G A C G T C G A T A C G T C G T A A G T C G T C A G C A T G C A T G A C T G C A T A C G T A C G T

PB0018.1_Foxk1_1/Jaspar

Match Rank:9
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---CTWGTTYACAATCACA
NNNTTTGTTTACATTTN--
 A C G T A C G T A C G T A G T C C G A T C G A T C A T G G A C T C A G T A G C T C G T A G T A C C G T A G T C A G C A T G T A C C T G A A G T C C G T A
T A G C A G C T A T C G G C A T C G A T A C G T C T A G A C G T C G A T A C G T C G T A A G T C G T C A G C A T G C A T G A C T G C A T A C G T A C G T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:10
Score:0.57
Offset:7
Orientation:forward strand
Alignment:CTWGTTYACAATCACA---
-------NWAACCACADNN
 A G T C C G A T C G A T C A T G G A C T C A G T A G C T C G T A G T A C C G T A G T C A G C A T G T A C C T G A A G T C C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C