Information for 4-GCCTGTGAGTGCYGCT (Motif 10)

A C T G A T G C A G T C A C G T A T C G A C G T A C T G C G T A A T C G C G A T A C T G A T G C G A C T A C T G G T A C C G A T
Reverse Opposite:
G C T A A C T G A G T C C T G A A T C G A G T C C G T A A T G C C G A T A G T C C G T A A T G C C G T A A C T G A T C G A G T C
p-value:1e-11
log p-value:-2.559e+01
Information Content per bp:1.779
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.41%
Number of Background Sequences with motif31.7
Percentage of Background Sequences with motif0.07%
Average Position of motif in Targets69.8 +/- 14.0bp
Average Position of motif in Background54.1 +/- 33.5bp
Strand Bias (log2 ratio + to - strand density)1.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL009.1_DCE_S_II/Jaspar

Match Rank:1
Score:0.61
Offset:1
Orientation:forward strand
Alignment:GCCTGTGAGTGCYGCT
-GCTGTG---------
 A C T G A T G C A G T C A C G T A T C G A C G T A C T G C G T A A T C G C G A T A C T G A T G C G A C T A C T G G T A C C G A T
A C G T T A C G T A G C C A G T A T C G G A C T A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:2
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:GCCTGTGAGTGCYGCT
---CTTGAGTGGCT--
 A C T G A T G C A G T C A C G T A T C G A C G T A C T G C G T A A T C G C G A T A C T G A T G C G A C T A C T G G T A C C G A T
A C G T A C G T A C G T A T G C G A C T C A G T C T A G C G T A A C T G C G A T A C T G A T C G G A T C G A C T A C G T A C G T

PB0130.1_Gm397_2/Jaspar

Match Rank:3
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:GCCTGTGAGTGCYGCT
NNGCGTGTGTGCNGCN
 A C T G A T G C A G T C A C G T A T C G A C G T A C T G C G T A A T C G C G A T A C T G A T G C G A C T A C T G G T A C C G A T
C A G T A C G T C T A G T G A C C A T G A C G T T A C G A G C T C A T G A G C T A C T G A G T C A G T C C A T G A G T C G A C T

PB0195.1_Zbtb3_2/Jaspar

Match Rank:4
Score:0.57
Offset:-5
Orientation:reverse strand
Alignment:-----GCCTGTGAGTGCYGCT
NNNNTGCCAGTGATTG-----
 A C G T A C G T A C G T A C G T A C G T A C T G A T G C A G T C A C G T A T C G A C G T A C T G C G T A A T C G C G A T A C T G A T G C G A C T A C T G G T A C C G A T
G C T A G C A T C G A T G A T C G A C T T C A G T G A C T A G C C G T A A C T G A G C T C A T G C G T A A G C T C G A T T C A G A C G T A C G T A C G T A C G T A C G T

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:5
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:GCCTGTGAGTGCYGCT
----TTAAGTGCTT--
 A C T G A T G C A G T C A C G T A T C G A C G T A C T G C G T A A T C G C G A T A C T G A T G C G A C T A C T G G T A C C G A T
A C G T A C G T A C G T A C G T A C G T C A G T T C G A C G T A A C T G A C G T C T A G A T G C A G C T A G C T A C G T A C G T

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:6
Score:0.55
Offset:4
Orientation:reverse strand
Alignment:GCCTGTGAGTGCYGCT
----TTGAGTGSTT--
 A C T G A T G C A G T C A C G T A T C G A C G T A C T G C G T A A T C G C G A T A C T G A T G C G A C T A C T G G T A C C G A T
A C G T A C G T A C G T A C G T G C A T A C G T C T A G C G T A C A T G C G A T C T A G A T C G G A C T G A C T A C G T A C G T

Gfi1b/MA0483.1/Jaspar

Match Rank:7
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:GCCTGTGAGTGCYGCT
TGCTGTGATTT-----
 A C T G A T G C A G T C A C G T A T C G A C G T A C T G C G T A A T C G C G A T A C T G A T G C G A C T A C T G G T A C C G A T
C G A T C T A G G A T C G C A T A T C G C G A T A C T G T C G A A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:8
Score:0.54
Offset:4
Orientation:forward strand
Alignment:GCCTGTGAGTGCYGCT
----TTRAGTGSYK--
 A C T G A T G C A G T C A C G T A T C G A C G T A C T G C G T A A T C G C G A T A C T G A T G C G A C T A C T G G T A C C G A T
A C G T A C G T A C G T A C G T A G C T G A C T C T A G C G T A C A T G C G A T C T A G A T C G G A C T C A G T A C G T A C G T

Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer

Match Rank:9
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:GCCTGTGAGTGCYGCT
-GCAGTGATTT-----
 A C T G A T G C A G T C A C G T A T C G A C G T A C T G C G T A A T C G C G A T A C T G A T G C G A C T A C T G G T A C C G A T
A C G T C T A G A G T C G C T A A T C G C G A T A C T G T C G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PH0141.1_Pknox2/Jaspar

Match Rank:10
Score:0.52
Offset:-4
Orientation:forward strand
Alignment:----GCCTGTGAGTGCYGCT
AAGCACCTGTCAATAT----
 A C G T A C G T A C G T A C G T A C T G A T G C A G T C A C G T A T C G A C G T A C T G C G T A A T C G C G A T A C T G A T G C G A C T A C T G G T A C C G A T
G C T A C T G A T C A G A T G C T C G A T A G C G T A C A G C T A C T G G A C T A G T C C T G A G T C A G C A T G C T A A G C T A C G T A C G T A C G T A C G T