Information for 3-GGAAATGTSGTAAAAG (Motif 4)

A C T G T A C G C T G A C T G A T C G A A C G T T A C G A G C T A T G C A T C G A G C T C T G A C T G A C G T A G T C A T C A G
Reverse Opposite:
A G T C A C G T A C G T A G C T A G C T C T G A A T G C T A C G C T G A A G T C C G T A A G C T A G C T A G C T A T G C A G T C
p-value:1e-15
log p-value:-3.668e+01
Information Content per bp:1.758
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.83%
Number of Background Sequences with motif1.3
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets45.3 +/- 21.1bp
Average Position of motif in Background46.3 +/- 15.1bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0066.1_Hoxc11/Jaspar

Match Rank:1
Score:0.62
Offset:2
Orientation:forward strand
Alignment:GGAAATGTSGTAAAAG--
--TAAAGTCGTAAAATAG
 A C T G T A C G C T G A C T G A T C G A A C G T T A C G A G C T A T G C A T C G A G C T C T G A C T G A C G T A G T C A T C A G A C G T A C G T
A C G T A C G T G A C T C T G A C G T A C T G A T C A G A G C T G A T C C T A G A C G T C G T A C G T A C G T A G C T A G A C T C T G A C A T G

GFY(?)/Promoter/Homer

Match Rank:2
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-GGAAATGTSGTAAAAG
GGGAATTGTAGT-----
 A C G T A C T G T A C G C T G A C T G A T C G A A C G T T A C G A G C T A T G C A T C G A G C T C T G A C T G A C G T A G T C A T C A G
C A T G T C A G T C A G T C G A T C G A G C A T A C G T A C T G A C G T C T G A A T C G A C G T A C G T A C G T A C G T A C G T A C G T

PH0047.1_Hoxa11/Jaspar

Match Rank:3
Score:0.60
Offset:2
Orientation:forward strand
Alignment:GGAAATGTSGTAAAAG--
--TAAAGTCGTAAAACAT
 A C T G T A C G C T G A C T G A T C G A A C G T T A C G A G C T A T G C A T C G A G C T C T G A C T G A C G T A G T C A T C A G A C G T A C G T
A C G T A C G T G C A T C T G A G C T A C T G A T C A G A G C T G T A C C T A G A C G T C G T A C G T A G C T A C G T A G A T C C T G A A C G T

PH0065.1_Hoxc10/Jaspar

Match Rank:4
Score:0.59
Offset:2
Orientation:forward strand
Alignment:GGAAATGTSGTAAAAG--
--TAAAGTCGTAAAACGT
 A C T G T A C G C T G A C T G A T C G A A C G T T A C G A G C T A T G C A T C G A G C T C T G A C T G A C G T A G T C A T C A G A C G T A C G T
A C G T A C G T G A C T C G T A C G T A C T G A T C A G A G C T G T A C C T A G A C G T C G T A C G T A G C T A C G T A G A T C A T C G A C G T

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:5
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----GGAAATGTSGTAAAAG
NACAGGAAAT----------
 A C G T A C G T A C G T A C G T A C T G T A C G C T G A C T G A T C G A A C G T T A C G A G C T A T G C A T C G A G C T C T G A C T G A C G T A G T C A T C A G
T A G C C T G A T A G C G T C A A C T G A C T G C G T A C G T A C T G A A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ETV6/MA0645.1/Jaspar

Match Rank:6
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---GGAAATGTSGTAAAAG
AGCGGAAGTG---------
 A C G T A C G T A C G T A C T G T A C G C T G A C T G A T C G A A C G T T A C G A G C T A T G C A T C G A G C T C T G A C T G A C G T A G T C A T C A G
T G C A A T C G T G A C C A T G C A T G C T G A C G T A T C A G A G C T C T A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Etv2(ETS)/ES-ER71-ChIP-Seq(GSE59402)/Homer(0.967)

Match Rank:7
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----GGAAATGTSGTAAAAG
NDCAGGAARTNN--------
 A C G T A C G T A C G T A C G T A C T G T A C G C T G A C T G A T C G A A C G T T A C G A G C T A T G C A T C G A G C T C T G A C T G A C G T A G T C A T C A G
T G C A C T G A T A G C G T C A A C T G A C T G C G T A G C T A T C A G G A C T T C A G T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PH0076.1_Hoxd11/Jaspar

Match Rank:8
Score:0.58
Offset:2
Orientation:forward strand
Alignment:GGAAATGTSGTAAAAG---
--TAAGGTCGTAAAATCCT
 A C T G T A C G C T G A C T G A T C G A A C G T T A C G A G C T A T G C A T C G A G C T C T G A C T G A C G T A G T C A T C A G A C G T A C G T A C G T
A C G T A C G T G A C T G C T A C T G A T C A G T C A G A G C T G A T C C T A G A C G T C G T A C G T A G C T A G C T A G C A T G A T C G A T C C A G T

EHF(ETS)/LoVo-EHF-ChIP-Seq(GSE49402)/Homer

Match Rank:9
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----GGAAATGTSGTAAAAG
AVCAGGAAGT----------
 A C G T A C G T A C G T A C G T A C T G T A C G C T G A C T G A T C G A A C G T T A C G A G C T A T G C A T C G A G C T C T G A C T G A C G T A G T C A T C A G
C G T A T A G C T A G C T G C A A C T G C T A G C G T A C G T A T C A G G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0058.1_Sfpi1_1/Jaspar

Match Rank:10
Score:0.58
Offset:-6
Orientation:forward strand
Alignment:------GGAAATGTSGTAAAAG
TTAAGAGGAAGTTA--------
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G T A C G C T G A C T G A T C G A A C G T T A C G A G C T A T G C A T C G A G C T C T G A C T G A C G T A G T C A T C A G
A G C T C G A T C G T A C G T A T C A G T C G A C T A G A C T G C G T A C G T A T A C G G A C T C G A T G T A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T