Information for 10-CGAGACGGGC (Motif 18)

T G A C C T A G C T G A A T C G C G T A A G T C T C A G C T A G A T C G A G T C
Reverse Opposite:
A C T G A T G C A G T C A G T C A C T G G C A T A T G C A G C T A G T C A C T G
p-value:1e-8
log p-value:-2.067e+01
Information Content per bp:1.835
Number of Target Sequences with motif15.0
Percentage of Target Sequences with motif1.73%
Number of Background Sequences with motif101.8
Percentage of Background Sequences with motif0.21%
Average Position of motif in Targets49.7 +/- 23.8bp
Average Position of motif in Background49.4 +/- 29.1bp
Strand Bias (log2 ratio + to - strand density)-1.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:1
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:CGAGACGGGC
CCAGACAG--
 T G A C C T A G C T G A A T C G C G T A A G T C T C A G C T A G A T C G A G T C
A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G A C G T A C G T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:CGAGACGGGC
CCAGACRSVB
 T G A C C T A G C T G A A T C G C G T A A G T C T C A G C T A G A T C G A G T C
T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C

HES5/MA0821.1/Jaspar

Match Rank:3
Score:0.60
Offset:0
Orientation:forward strand
Alignment:CGAGACGGGC--
CGGCACGTGCCA
 T G A C C T A G C T G A A T C G C G T A A G T C T C A G C T A G A T C G A G T C A C G T A C G T
G A T C T C A G T C A G A G T C C T G A G A T C C T A G A G C T A C T G A G T C A G T C C T G A

HEY2/MA0649.1/Jaspar

Match Rank:4
Score:0.59
Offset:1
Orientation:forward strand
Alignment:CGAGACGGGC-
-GACACGTGCC
 T G A C C T A G C T G A A T C G C G T A A G T C T C A G C T A G A T C G A G T C A C G T
A C G T C T A G T C G A T G A C C T G A G T A C T A C G G A C T A T C G A G T C T A G C

Hes2/MA0616.1/Jaspar

Match Rank:5
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---CGAGACGGGC
TAACGACACGTGC
 A C G T A C G T A C G T T G A C C T A G C T G A A T C G C G T A A G T C T C A G C T A G A T C G A G T C
A C G T C G T A C G T A T A G C A T C G C T G A G T A C C T G A G T A C C T A G A C G T C T A G G T A C

HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer

Match Rank:6
Score:0.57
Offset:2
Orientation:forward strand
Alignment:CGAGACGGGC
--RTACGTGC
 T G A C C T A G C T G A A T C G C G T A A G T C T C A G C T A G A T C G A G T C
A C G T A C G T C T G A C A G T C T G A A G T C C T A G G A C T A T C G G T A C

PB0060.1_Smad3_1/Jaspar

Match Rank:7
Score:0.57
Offset:-5
Orientation:forward strand
Alignment:-----CGAGACGGGC--
CAAATCCAGACATCACA
 A C G T A C G T A C G T A C G T A C G T T G A C C T A G C T G A A T C G C G T A A G T C T C A G C T A G A T C G A G T C A C G T A C G T
G T A C C T G A C G T A C G T A C G A T A G T C A G T C T G C A C T A G G T C A G T A C C T G A A C G T A G T C G C T A T A C G G T C A

Zfp809(Zf)/ES-Zfp809-ChIP-Seq(GSE70799)/Homer

Match Rank:8
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--CGAGACGGGC---
TCCCAGMCRAGCCCC
 A C G T A C G T T G A C C T A G C T G A A T C G C G T A A G T C T C A G C T A G A T C G A G T C A C G T A C G T A C G T
A G C T A G T C A G T C A G T C C T G A T C A G T G C A G A T C T C G A C G T A A C T G A T G C G T A C G T A C G A T C

ARNT::HIF1A/MA0259.1/Jaspar

Match Rank:9
Score:0.55
Offset:2
Orientation:forward strand
Alignment:CGAGACGGGC
--GGACGTGC
 T G A C C T A G C T G A A T C G C G T A A G T C T C A G C T A G A T C G A G T C
A C G T A C G T T A C G A C T G T C G A A G T C A C T G A C G T A C T G T A G C

HES7/MA0822.1/Jaspar

Match Rank:10
Score:0.55
Offset:0
Orientation:forward strand
Alignment:CGAGACGGGC--
TGGCACGTGCCA
 T G A C C T A G C T G A A T C G C G T A A G T C T C A G C T A G A T C G A G T C A C G T A C G T
G A C T T C A G T C A G G A T C T C G A A G T C C T A G G A C T T C A G G A T C A G T C C T G A