p-value: | 1e-10 |
log p-value: | -2.490e+01 |
Information Content per bp: | 1.810 |
Number of Target Sequences with motif | 12.0 |
Percentage of Target Sequences with motif | 1.38% |
Number of Background Sequences with motif | 40.0 |
Percentage of Background Sequences with motif | 0.08% |
Average Position of motif in Targets | 47.2 +/- 28.3bp |
Average Position of motif in Background | 50.9 +/- 28.5bp |
Strand Bias (log2 ratio + to - strand density) | -0.5 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer
Match Rank: | 1 |
Score: | 0.68 |
Offset: | 3 |
Orientation: | forward strand |
Alignment: | GKCCACAGCAGAG-- ---CACAGCAGGGGG |
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Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer
Match Rank: | 2 |
Score: | 0.60 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | GKCCACAGCAGAG---- --DCHCAGCAGGRGGCC |
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POL009.1_DCE_S_II/Jaspar
Match Rank: | 3 |
Score: | 0.60 |
Offset: | 3 |
Orientation: | reverse strand |
Alignment: | GKCCACAGCAGAG ---CACAGN---- |
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RUNX1/MA0002.2/Jaspar
Match Rank: | 4 |
Score: | 0.59 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -GKCCACAGCAGAG AAACCACAGAN--- |
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ZIC1/MA0696.1/Jaspar
Match Rank: | 5 |
Score: | 0.58 |
Offset: | 3 |
Orientation: | reverse strand |
Alignment: | GKCCACAGCAGAG---- ---CACAGCGGGGGGTC |
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RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer
Match Rank: | 6 |
Score: | 0.57 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -GKCCACAGCAGAG AAACCACAGC---- |
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RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer
Match Rank: | 7 |
Score: | 0.57 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --GKCCACAGCAGAG NWAACCACADNN--- |
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PB0207.1_Zic3_2/Jaspar
Match Rank: | 8 |
Score: | 0.56 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | GKCCACAGCAGAG-- GAGCACAGCAGGACA |
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NHLH1/MA0048.2/Jaspar
Match Rank: | 9 |
Score: | 0.56 |
Offset: | 3 |
Orientation: | forward strand |
Alignment: | GKCCACAGCAGAG ---CGCAGCTGCG |
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RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer
Match Rank: | 10 |
Score: | 0.55 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --GKCCACAGCAGAG NAAACCACAG----- |
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