Information for 15-GCGGCCATGTTTG (Motif 12)

A C T G A G T C T A C G C T A G A G T C A T G C T G C A A G C T T A C G A G C T C G A T A C G T C T A G
Reverse Opposite:
G A T C G T C A C G T A T C G A A T G C T C G A A C G T A T C G A C T G A G T C A T G C A C T G T A G C
p-value:1e-11
log p-value:-2.596e+01
Information Content per bp:1.682
Number of Target Sequences with motif20.0
Percentage of Target Sequences with motif2.13%
Number of Background Sequences with motif125.5
Percentage of Background Sequences with motif0.28%
Average Position of motif in Targets41.3 +/- 22.3bp
Average Position of motif in Background54.3 +/- 40.4bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

YY1/MA0095.2/Jaspar

Match Rank:1
Score:0.85
Offset:0
Orientation:reverse strand
Alignment:GCGGCCATGTTTG
GCNGCCATCTTG-
 A C T G A G T C T A C G C T A G A G T C A T G C T G C A A G C T T A C G A G C T C G A T A C G T C T A G
C A T G A G T C T G A C C A T G A G T C A G T C C T G A A C G T A G T C A G C T G A C T A C T G A C G T

YY1(Zf)/Promoter/Homer

Match Rank:2
Score:0.84
Offset:0
Orientation:reverse strand
Alignment:GCGGCCATGTTTG
GCCGCCATCTTG-
 A C T G A G T C T A C G C T A G A G T C A T G C T G C A A G C T T A C G A G C T C G A T A C G T C T A G
C A T G G A T C A T G C C T A G A G T C A G T C C G T A A C G T A T G C A G C T A C G T A T C G A C G T

YY2/MA0748.1/Jaspar

Match Rank:3
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-GCGGCCATGTTTG
GTCCGCCATTA---
 A C G T A C T G A G T C T A C G C T A G A G T C A T G C T G C A A G C T T A C G A G C T C G A T A C G T C T A G
C T A G C G A T G A T C A T G C T A C G T G A C A G T C C G T A C G A T G A C T C G T A A C G T A C G T A C G T

Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer

Match Rank:4
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:GCGGCCATGTTTG--
SCAGYCADGCATGAC
 A C T G A G T C T A C G C T A G A G T C A T G C T G C A A G C T T A C G A G C T C G A T A C G T C T A G A C G T A C G T
A T C G G T A C C G T A A T C G A G C T A T G C C G T A C T A G A T C G A G T C T C G A C A G T T C A G T C G A T G A C

PB0164.1_Smad3_2/Jaspar

Match Rank:5
Score:0.60
Offset:-5
Orientation:forward strand
Alignment:-----GCGGCCATGTTTG
TACGCCCCGCCACTCTG-
 A C G T A C G T A C G T A C G T A C G T A C T G A G T C T A C G C T A G A G T C A T G C T G C A A G C T T A C G A G C T C G A T A C G T C T A G
C A G T G T C A G T A C A C T G G A T C A G T C T A G C A T G C T A C G A G T C G T A C G T C A G T A C G A C T A G T C G A C T A C T G A C G T

PAX5(Paired,Homeobox)/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer

Match Rank:6
Score:0.57
Offset:0
Orientation:forward strand
Alignment:GCGGCCATGTTTG---
GCAGCCAAGCGTGACN
 A C T G A G T C T A C G C T A G A G T C A T G C T G C A A G C T T A C G A G C T C G A T A C G T C T A G A C G T A C G T A C G T
A C T G G A T C C T G A A T C G A G T C T A G C C T G A C G T A T A C G A G T C C T A G C A G T T C A G T C G A T G A C G A T C

NFIC/MA0161.1/Jaspar

Match Rank:7
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:GCGGCCATGTTTG
--TGCCAA-----
 A C T G A G T C T A C G C T A G A G T C A T G C T G C A A G C T T A C G A G C T C G A T A C G T C T A G
A C G T A C G T G C A T C A T G G A T C A G T C G T C A C T G A A C G T A C G T A C G T A C G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:8
Score:0.55
Offset:0
Orientation:forward strand
Alignment:GCGGCCATGTTTG
CGTGCCAAG----
 A C T G A G T C T A C G C T A G A G T C A T G C T G C A A G C T T A C G A G C T C G A T A C G T C T A G
T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G A C G T A C G T A C G T A C G T

GLI2/MA0734.1/Jaspar

Match Rank:9
Score:0.55
Offset:0
Orientation:forward strand
Alignment:GCGGCCATGTTTG
GCGACCACACTG-
 A C T G A G T C T A C G C T A G A G T C A T G C T G C A A G C T T A C G A G C T C G A T A C G T C T A G
C T A G T G A C C A T G T G C A A G T C A T G C G T C A A T G C T G C A G T A C C G A T C T A G A C G T

Creb3l2/MA0608.1/Jaspar

Match Rank:10
Score:0.53
Offset:3
Orientation:forward strand
Alignment:GCGGCCATGTTTG
---GCCACGTGT-
 A C T G A G T C T A C G C T A G A G T C A T G C T G C A A G C T T A C G A G C T C G A T A C G T C T A G
A C G T A C G T A C G T A C T G G T A C A T G C C G T A A G T C A C T G A C G T A T C G C A G T A C G T