Information for 1-VYTCYGATTGGYY (Motif 1)

T A G C A G T C C A G T A G T C A G C T A T C G C T G A A G C T C G A T A C T G A C T G A G T C A G C T
Reverse Opposite:
T C G A C T A G A G T C A G T C C G T A T C G A A G C T T A G C T C G A T A C G G T C A C T A G A C T G
p-value:1e-193
log p-value:-4.447e+02
Information Content per bp:1.583
Number of Target Sequences with motif311.0
Percentage of Target Sequences with motif33.09%
Number of Background Sequences with motif1750.0
Percentage of Background Sequences with motif3.85%
Average Position of motif in Targets49.9 +/- 24.0bp
Average Position of motif in Background48.2 +/- 38.0bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.23
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFY(CCAAT)/Promoter/Homer

Match Rank:1
Score:0.96
Offset:3
Orientation:reverse strand
Alignment:VYTCYGATTGGYY
---CCGATTGGCT
 T A G C A G T C C A G T A G T C A G C T A T C G C T G A A G C T C G A T A C T G A C T G A G T C A G C T
A C G T A C G T A C G T A T G C A G T C A T C G C G T A A C G T A C G T A C T G A C T G G A T C A G C T

NFYB/MA0502.1/Jaspar

Match Rank:2
Score:0.93
Offset:3
Orientation:reverse strand
Alignment:VYTCYGATTGGYY-----
---CTGATTGGTCNATTT
 T A G C A G T C C A G T A G T C A G C T A T C G C T G A A G C T C G A T A C T G A C T G A G T C A G C T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A T G C A G C T A T C G C G T A A G C T A C G T A C T G A C T G G A C T A G T C T A G C T C G A C A G T C A G T A G C T

POL004.1_CCAAT-box/Jaspar

Match Rank:3
Score:0.93
Offset:4
Orientation:reverse strand
Alignment:VYTCYGATTGGYY---
----TGATTGGCTANN
 T A G C A G T C C A G T A G T C A G C T A T C G C T G A A G C T C G A T A C T G A C T G A G T C A G C T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A G C T A T C G G C T A G C A T A C G T C T A G T A C G G A T C G A C T C T G A T C A G C A G T

NFYA/MA0060.2/Jaspar

Match Rank:4
Score:0.87
Offset:-3
Orientation:forward strand
Alignment:---VYTCYGATTGGYY--
AGAGTGCTGATTGGTCCA
 A C G T A C G T A C G T T A G C A G T C C A G T A G T C A G C T A T C G C T G A A G C T C G A T A C T G A C T G A G T C A G C T A C G T A C G T
G C T A C A T G T G C A T A C G G A C T A C T G A G T C A G C T A T C G C T G A A G C T C G A T T C A G T A C G G A C T A G T C T A G C T C G A

Dux/MA0611.1/Jaspar

Match Rank:5
Score:0.76
Offset:3
Orientation:reverse strand
Alignment:VYTCYGATTGGYY
---TTGATTGN--
 T A G C A G T C C A G T A G T C A G C T A T C G C T G A A G C T C G A T A C T G A C T G A G T C A G C T
A C G T A C G T A C G T G A C T A C G T A C T G C G T A A C G T A C G T C T A G A T C G A C G T A C G T

NFIC/MA0161.1/Jaspar

Match Rank:6
Score:0.76
Offset:7
Orientation:forward strand
Alignment:VYTCYGATTGGYY
-------TTGGCA
 T A G C A G T C C A G T A G T C A G C T A T C G C T G A A G C T C G A T A C T G A C T G A G T C A G C T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T C A G T T C A G C T A G G T A C C G T A

PH0026.1_Duxbl/Jaspar

Match Rank:7
Score:0.71
Offset:-2
Orientation:reverse strand
Alignment:--VYTCYGATTGGYY--
NNNNGTTGATTGGGTCG
 A C G T A C G T T A G C A G T C C A G T A G T C A G C T A T C G C T G A A G C T C G A T A C T G A C T G A G T C A G C T A C G T A C G T
A T G C C G T A A G T C A G T C T C A G G A C T C G A T C T A G C T G A A C G T A C G T C T A G T C A G T C A G G A C T G A T C T C A G

NFIX/MA0671.1/Jaspar

Match Rank:8
Score:0.71
Offset:6
Orientation:reverse strand
Alignment:VYTCYGATTGGYY--
------NTTGGCANN
 T A G C A G T C C A G T A G T C A G C T A T C G C T G A A G C T C G A T A C T G A C T G A G T C A G C T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G

MSX2/MA0708.1/Jaspar

Match Rank:9
Score:0.70
Offset:3
Orientation:reverse strand
Alignment:VYTCYGATTGGYY
---NTAATTGG--
 T A G C A G T C C A G T A G T C A G C T A T C G C T G A A G C T C G A T A C T G A C T G A G T C A G C T
A C G T A C G T A C G T A G C T C A G T T C G A C G T A A C G T C A G T C T A G A T C G A C G T A C G T

MSX1/MA0666.1/Jaspar

Match Rank:10
Score:0.69
Offset:3
Orientation:reverse strand
Alignment:VYTCYGATTGGYY
---NTAATTGG--
 T A G C A G T C C A G T A G T C A G C T A T C G C T G A A G C T C G A T A C T G A C T G A G T C A G C T
A C G T A C G T A C G T A G T C A C G T T G C A G T C A A C G T A C G T C T A G T A C G A C G T A C G T