Information for 5-GTTTGGCWSA (Motif 5)

A C T G C G A T A C G T C G A T T C A G A T C G G T A C C G A T A T G C T G C A
Reverse Opposite:
A C G T A T C G G C T A A C T G A T G C A G T C C G T A C G T A C G T A A G T C
p-value:1e-14
log p-value:-3.378e+01
Information Content per bp:1.763
Number of Target Sequences with motif32.0
Percentage of Target Sequences with motif3.41%
Number of Background Sequences with motif266.0
Percentage of Background Sequences with motif0.56%
Average Position of motif in Targets38.9 +/- 26.0bp
Average Position of motif in Background48.1 +/- 31.9bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFIC/MA0161.1/Jaspar

Match Rank:1
Score:0.67
Offset:2
Orientation:forward strand
Alignment:GTTTGGCWSA
--TTGGCA--
 A C T G C G A T A C G T C G A T T C A G A T C G G T A C C G A T A T G C T G C A
A C G T A C G T G A C T C A G T T C A G C T A G G T A C C G T A A C G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:2
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:GTTTGGCWSA
-NTTGGCANN
 A C T G C G A T A C G T C G A T T C A G A T C G G T A C C G A T A T G C T G C A
A C G T A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G

NFIA/MA0670.1/Jaspar

Match Rank:3
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:GTTTGGCWSA
NNTTGGCANN
 A C T G C G A T A C G T C G A T T C A G A T C G G T A C C G A T A T G C T G C A
G C T A A G T C A C G T A C G T A C T G A C T G A G T C C G T A G T A C A G T C

PB0121.1_Foxj3_2/Jaspar

Match Rank:4
Score:0.62
Offset:-6
Orientation:reverse strand
Alignment:------GTTTGGCWSA-
NNCTTTGTTTTGNTNNN
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G A T A C G T C G A T T C A G A T C G G T A C C G A T A T G C T G C A A C G T
G C A T A T G C G T A C C G A T G C A T C G A T C T A G C G A T C A G T C G A T A C G T C T A G C A T G G A C T T A C G G C A T A C G T

PB0029.1_Hic1_1/Jaspar

Match Rank:5
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----GTTTGGCWSA--
NGTAGGTTGGCATNNN
 A C G T A C G T A C G T A C G T A C T G C G A T A C G T C G A T T C A G A T C G G T A C C G A T A T G C T G C A A C G T A C G T
C T A G C T A G A G C T C G T A T C A G T C A G A C G T C A G T A C T G A T C G A G T C C G T A G A C T T G C A T C A G G C A T

NFYB/MA0502.1/Jaspar

Match Rank:6
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--GTTTGGCWSA---
CTGATTGGTCNATTT
 A C G T A C G T A C T G C G A T A C G T C G A T T C A G A T C G G T A C C G A T A T G C T G C A A C G T A C G T A C G T
A T G C A G C T A T C G C G T A A G C T A C G T A C T G A C T G G A C T A G T C T A G C T C G A C A G T C A G T A G C T

PB0036.1_Irf6_1/Jaspar

Match Rank:7
Score:0.58
Offset:-6
Orientation:reverse strand
Alignment:------GTTTGGCWSA-
NNNTTGGTTTCGNTNNN
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G A T A C G T C G A T T C A G A T C G G T A C C G A T A T G C T G C A A C G T
G C T A G T A C G C A T A C G T A G C T C T A G A C T G A C G T G C A T A C G T A G T C C T A G C T G A G A C T G A T C G C T A C A T G

Hic1/MA0739.1/Jaspar

Match Rank:8
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:GTTTGGCWSA
GGTTGGCAT-
 A C T G C G A T A C G T C G A T T C A G A T C G G T A C C G A T A T G C T G C A
T C A G T A C G A G C T C A G T C A T G A T C G A G T C T C G A A G C T A C G T

NFY(CCAAT)/Promoter/Homer

Match Rank:9
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--GTTTGGCWSA
CCGATTGGCT--
 A C G T A C G T A C T G C G A T A C G T C G A T T C A G A T C G G T A C C G A T A T G C T G C A
A T G C A G T C A T C G C G T A A C G T A C G T A C T G A C T G G A T C A G C T A C G T A C G T

POL004.1_CCAAT-box/Jaspar

Match Rank:10
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-GTTTGGCWSA-
TGATTGGCTANN
 A C G T A C T G C G A T A C G T C G A T T C A G A T C G G T A C C G A T A T G C T G C A A C G T
A G C T A T C G G C T A G C A T A C G T C T A G T A C G G A T C G A C T C T G A T C A G C A G T