Information for 16-GAGAGATCAC (Motif 24)

A C T G C G T A A C T G C G T A C T A G C G T A A C G T A G T C C G T A A G T C
Reverse Opposite:
A C T G A C G T C T A G C G T A A C G T A G T C A C G T A G T C A C G T A G T C
p-value:1e-3
log p-value:-8.797e+00
Information Content per bp:1.952
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.32%
Number of Background Sequences with motif5.3
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets53.4 +/- 24.7bp
Average Position of motif in Background71.0 +/- 21.2bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)2.67
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0126.1_Gata5_2/Jaspar

Match Rank:1
Score:0.70
Offset:-4
Orientation:forward strand
Alignment:----GAGAGATCAC---
GACAGAGATATCAGTGT
 A C G T A C G T A C G T A C G T A C T G C G T A A C T G C G T A C T A G C G T A A C G T A G T C C G T A A G T C A C G T A C G T A C G T
T C A G T G C A A G T C G T C A C T A G G T C A C A T G T C G A C A G T G T C A C A G T G A T C C G T A C T A G G A C T A C G T A C G T

PH0037.1_Hdx/Jaspar

Match Rank:2
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---GAGAGATCAC----
AAGGCGAAATCATCGCA
 A C G T A C G T A C G T A C T G C G T A A C T G C G T A C T A G C G T A A C G T A G T C C G T A A G T C A C G T A C G T A C G T A C G T
C G T A C T G A A C T G C A T G G T A C C T A G T G C A C G T A C G T A A C G T A T G C G C T A G A C T G A T C A T C G G T A C T G C A

NR4A2/MA0160.1/Jaspar

Match Rank:3
Score:0.65
Offset:2
Orientation:forward strand
Alignment:GAGAGATCAC
--AAGGTCAC
 A C T G C G T A A C T G C G T A C T A G C G T A A C G T A G T C C G T A A G T C
A C G T A C G T C T G A C T G A A C T G C T A G G A C T A G T C C G T A T G A C

PB0053.1_Rara_1/Jaspar

Match Rank:4
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---GAGAGATCAC---
TCTCAAAGGTCACCTG
 A C G T A C G T A C G T A C T G C G T A A C T G C G T A C T A G C G T A A C G T A G T C C G T A A G T C A C G T A C G T A C G T
C A G T G T A C A G C T G T A C G C T A C T G A T C G A A C T G A C T G A C G T A G T C C T G A G A T C T A G C G A C T C A T G

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:5
Score:0.62
Offset:1
Orientation:forward strand
Alignment:GAGAGATCAC
-AGRGGTCA-
 A C T G C G T A A C T G C G T A C T A G C G T A A C G T A G T C C G T A A G T C
A C G T T C G A T C A G T C G A A C T G C A T G A C G T A G T C C T G A A C G T

GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:6
Score:0.61
Offset:3
Orientation:forward strand
Alignment:GAGAGATCAC-
---AGATAASR
 A C T G C G T A A C T G C G T A C T A G C G T A A C G T A G T C C G T A A G T C A C G T
A C G T A C G T A C G T G C T A A T C G G C T A G A C T G C T A T C G A T A G C T C G A

PB0118.1_Esrra_2/Jaspar

Match Rank:7
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---GAGAGATCAC----
GGCGAGGGGTCAAGGGC
 A C G T A C G T A C G T A C T G C G T A A C T G C G T A C T A G C G T A A C G T A G T C C G T A A G T C A C G T A C G T A C G T A C G T
T A C G C A T G A T G C A C T G G C T A T A C G T C A G C A T G A C T G C G A T A G T C C T G A G C T A C T A G A T C G A T C G G T A C

PB0139.1_Irf5_2/Jaspar

Match Rank:8
Score:0.59
Offset:-6
Orientation:forward strand
Alignment:------GAGAGATCAC
TTGACCGAGAATTCC-
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A A C T G C G T A C T A G C G T A A C G T A G T C C G T A A G T C
A G C T G C A T C T A G C G T A G A C T G T A C C T A G C T G A A T C G C G T A C T G A G A C T G A C T A G T C T A G C A C G T

PB0049.1_Nr2f2_1/Jaspar

Match Rank:9
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---GAGAGATCAC---
TCTCAAAGGTCACGAG
 A C G T A C G T A C G T A C T G C G T A A C T G C G T A C T A G C G T A A C G T A G T C C G T A A G T C A C G T A C G T A C G T
C A G T G T A C A C G T G T A C C G T A C T G A C T G A A C T G A C T G A C G T A G T C C T G A G T A C T A C G C G T A A C T G

Gata4/MA0482.1/Jaspar

Match Rank:10
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:GAGAGATCAC-
NNGAGATAAGA
 A C T G C G T A A C T G C G T A C T A G C G T A A C G T A G T C C G T A A G T C A C G T
T C A G C T A G T A C G C G T A A C T G C G T A A C G T C G T A C T G A T A C G T C G A