Motif 22

Information for 21-CGCCTCAGCCGCC (Motif 22)

Reverse Opposite:

p-value:	1e-4
log p-value:	-1.067e+01
Information Content per bp:	1.968
Number of Target Sequences with motif	4.0
Percentage of Target Sequences with motif	0.43%
Number of Background Sequences with motif	8.4
Percentage of Background Sequences with motif	0.02%
Average Position of motif in Targets	48.2 +/- 30.6bp
Average Position of motif in Background	61.4 +/- 16.7bp
Strand Bias (log2 ratio + to - strand density)	0.0
Multiplicity (# of sites on avg that occur together)	1.50
Motif File:	file (matrix) reverse opposite
SVG Files for Logos:	forward logo reverse opposite

Matches to Known Motifs

TFAP2B(var.2)/MA0812.1/Jaspar

Match Rank:	1
Score:	0.64
Offset:	0
Orientation:	forward strand
Alignment:	CGCCTCAGCCGCC AGCCTCAGGCA--

TFAP2A/MA0003.3/Jaspar

Match Rank:	2
Score:	0.64
Offset:	0
Orientation:	forward strand
Alignment:	CGCCTCAGCCGCC CGCCTCAGGCA--

TFAP2C(var.2)/MA0814.1/Jaspar

Match Rank:	3
Score:	0.63
Offset:	0
Orientation:	reverse strand
Alignment:	CGCCTCAGCCGCC NGCCTNAGGCN--

PB0088.1_Tcfap2e_1/Jaspar

Match Rank:	4
Score:	0.59
Offset:	-2
Orientation:	reverse strand
Alignment:	--CGCCTCAGCCGCC NTNGCCTCAGGCNNN

ZNF165(Zf)/WHIM12-ZNF165-ChIP-Seq(GSE65937)/Homer

Match Rank:	5
Score:	0.58
Offset:	0
Orientation:	reverse strand
Alignment:	CGCCTCAGCCGCC-- TGCCTGCGYCMCCTT

Klf9(Zf)/GBM-Klf9-ChIP-Seq(GSE62211)/Homer

Match Rank:	6
Score:	0.57
Offset:	1
Orientation:	forward strand
Alignment:	CGCCTCAGCCGCC -GCCACRCCCACY

EGR1/MA0162.2/Jaspar

Match Rank:	7
Score:	0.56
Offset:	-1
Orientation:	forward strand
Alignment:	-CGCCTCAGCCGCC CCCCCGCCCCCGCC

NHLH1/MA0048.2/Jaspar

Match Rank:	8
Score:	0.56
Offset:	3
Orientation:	forward strand
Alignment:	CGCCTCAGCCGCC ---CGCAGCTGCG

Myog/MA0500.1/Jaspar

Match Rank:	9
Score:	0.56
Offset:	2
Orientation:	reverse strand
Alignment:	CGCCTCAGCCGCC --NNGCAGCTGTC

PB0190.1_Tcfap2b_2/Jaspar

Match Rank:	10
Score:	0.55
Offset:	-2
Orientation:	reverse strand
Alignment:	--CGCCTCAGCCGCC ANTGCCTGAGGCAAN