Information for 10-GCGTCAGATA (Motif 13)

A C T G G T A C A C T G A C G T A G T C C G T A A C T G C G T A A G C T G T C A
Reverse Opposite:
A C G T T C G A C G A T A G T C A C G T A C T G C G T A G T A C A C T G A G T C
p-value:1e-9
log p-value:-2.096e+01
Information Content per bp:1.870
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.53%
Number of Background Sequences with motif2.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets63.2 +/- 16.3bp
Average Position of motif in Background50.6 +/- 23.6bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.20
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MF0002.1_bZIP_CREB/G-box-like_subclass/Jaspar

Match Rank:1
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:GCGTCAGATA
ACGTCA----
 A C T G G T A C A C T G A C G T A G T C C G T A A C T G C G T A A G C T G T C A
C T G A A G T C T C A G A C G T G T A C C G T A A C G T A C G T A C G T A C G T

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--GCGTCAGATA
AGGTGHCAGACA
 A C G T A C G T A C T G G T A C A C T G A C G T A G T C C G T A A C T G C G T A A G C T G T C A
C T G A C T A G A T C G G C A T A C T G G T A C A T G C C G T A A C T G G C T A A G T C C G T A

CREB1/MA0018.2/Jaspar

Match Rank:3
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--GCGTCAGATA
TGACGTCA----
 A C G T A C G T A C T G G T A C A C T G A C G T A G T C C G T A A C T G C G T A A G C T G T C A
G C A T A C T G C T G A A G T C A T C G A C G T A T G C T C G A A C G T A C G T A C G T A C G T

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:4
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--GCGTCAGATA-
AGGTGNCAGACAG
 A C G T A C G T A C T G G T A C A C T G A C G T A G T C C G T A A C T G C G T A A G C T G T C A A C G T
C T G A C T A G A T C G C G A T A T C G G T C A A T G C C G T A A C T G T G C A A G T C C G T A A T C G

FOS::JUN/MA0099.2/Jaspar

Match Rank:5
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-GCGTCAGATA
TGAGTCA----
 A C G T A C T G G T A C A C T G A C G T A G T C C G T A A C T G C G T A A G C T G T C A
G A C T A T C G G C T A A C T G A C G T G T A C C T G A A C G T A C G T A C G T A C G T

Atf1/MA0604.1/Jaspar

Match Rank:6
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-GCGTCAGATA
TACGTCAT---
 A C G T A C T G G T A C A C T G A C G T A G T C C G T A A C T G C G T A A G C T G T C A
A G C T C T G A A G T C A C T G A C G T T G A C C G T A A G C T A C G T A C G T A C G T

PB0153.1_Nr2f2_2/Jaspar

Match Rank:7
Score:0.59
Offset:-6
Orientation:forward strand
Alignment:------GCGTCAGATA
CGCGCCGGGTCACGTA
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G G T A C A C T G A C G T A G T C C G T A A C T G C G T A A G C T G T C A
T A G C A C T G T G A C A C T G A G T C A T G C C T A G A C T G A C T G A C G T A G T C C T G A T A G C A C T G A G C T G C T A

GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:8
Score:0.59
Offset:5
Orientation:forward strand
Alignment:GCGTCAGATA---
-----AGATAASR
 A C T G G T A C A C T G A C G T A G T C C G T A A C T G C G T A A G C T G T C A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G C T A A T C G G C T A G A C T G C T A T C G A T A G C T C G A

Gata1(Zf)/K562-GATA1-ChIP-Seq(GSE18829)/Homer

Match Rank:9
Score:0.58
Offset:4
Orientation:forward strand
Alignment:GCGTCAGATA----
----CAGATAAGGN
 A C T G G T A C A C T G A C G T A G T C C G T A A C T G C G T A A G C T G T C A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T A G C G C T A A C T G C G T A A C G T C G T A C G T A T A C G T C A G T C G A

GATA2/MA0036.2/Jaspar

Match Rank:10
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:GCGTCAGATA-------
---NCAGATAAGAANNN
 A C T G G T A C A C T G A C G T A G T C C G T A A C T G C G T A A G C T G T C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C G T A T A G C C G T A A C T G C G T A A C G T C G T A C T G A T A C G T C G A C G T A G A C T G A T C G C A T