Information for 8-WKCMMMTTWWAGG (Motif 8)

G C A T A C G T A G T C G T A C T G A C G T A C A G C T A C G T C G A T C G T A C G T A A C T G A C T G
Reverse Opposite:
A G T C A G T C A C G T C G A T C G T A C G T A C T G A A C T G A C T G A C T G C T A G G T C A C G T A
p-value:1e-12
log p-value:-2.792e+01
Information Content per bp:1.793
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.16%
Number of Background Sequences with motif20.5
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets48.8 +/- 20.4bp
Average Position of motif in Background51.6 +/- 33.8bp
Strand Bias (log2 ratio + to - strand density)1.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0184.1_Tbp_2/Jaspar

Match Rank:1
Score:0.61
Offset:2
Orientation:forward strand
Alignment:WKCMMMTTWWAGG----
--CCGATTTAAGCGACC
 G C A T A C G T A G T C G T A C T G A C G T A C A G C T A C G T C G A T C G T A C G T A A C T G A C T G A C G T A C G T A C G T A C G T
A C G T A C G T T G A C A T G C A T C G C G T A G A C T C G A T C G A T G T C A G C T A A T C G T A G C A C T G G C T A A C G T G T A C

CArG(MADS)/PUER-Srf-ChIP-Seq(Sullivan_et_al.)/Homer

Match Rank:2
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:WKCMMMTTWWAGG
-TNCCATATATGG
 G C A T A C G T A G T C G T A C T G A C G T A C A G C T A C G T C G A T C G T A C G T A A C T G A C T G
A C G T C A G T A C T G G A T C A G T C G C T A C G A T C G T A G C A T G C T A C G A T C T A G A T C G

TATA-Box(TBP)/Promoter/Homer

Match Rank:3
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:WKCMMMTTWWAGG
-GNCTATAAAAGG
 G C A T A C G T A G T C G T A C T G A C G T A C A G C T A C G T C G A T C G T A C G T A A C T G A C T G
A C G T A T C G A T C G A T G C A G C T G C T A A C G T C G T A C G T A C T G A C T G A C T A G T A C G

MEF2D/MA0773.1/Jaspar

Match Rank:4
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:WKCMMMTTWWAGG
-TCTATTTATAGN
 G C A T A C G T A G T C G T A C T G A C G T A C A G C T A C G T C G A T C G T A C G T A A C T G A C T G
A C G T C A G T A G T C A G C T C G T A C G A T G C A T C G A T G C T A C A G T C T G A C T A G G A C T

MEF2A/MA0052.3/Jaspar

Match Rank:5
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:WKCMMMTTWWAGG
-TCTATTTTTAGA
 G C A T A C G T A G T C G T A C T G A C G T A C A G C T A C G T C G A T C G T A C G T A A C T G A C T G
A C G T C A G T G A T C C A G T C T G A C G A T C G A T C G A T G C A T C G A T C T G A C A T G G T C A

PB0078.1_Srf_1/Jaspar

Match Rank:6
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:WKCMMMTTWWAGG--
-TNCCATATATGGNA
 G C A T A C G T A G T C G T A C T G A C G T A C A G C T A C G T C G A T C G T A C G T A A C T G A C T G A C G T A C G T
A C G T C A G T C G A T G T A C A G T C C G T A C G A T C G T A G C A T C G T A C G A T C T A G C A T G C G T A C G T A

HOXA5/MA0158.1/Jaspar

Match Rank:7
Score:0.55
Offset:4
Orientation:reverse strand
Alignment:WKCMMMTTWWAGG
----AATTAGTG-
 G C A T A C G T A G T C G T A C T G A C G T A C A G C T A C G T C G A T C G T A C G T A A C T G A C T G
A C G T A C G T A C G T A C G T T G C A C G T A A G C T C G A T G C T A T A C G G A C T A C T G A C G T

MF0008.1_MADS_class/Jaspar

Match Rank:8
Score:0.55
Offset:3
Orientation:forward strand
Alignment:WKCMMMTTWWAGG
---CCATATATGG
 G C A T A C G T A G T C G T A C T G A C G T A C A G C T A C G T C G A T C G T A C G T A A C T G A C T G
A C G T A C G T A C G T G A T C A G T C G C T A C G A T C G T A C G A T C G T A G C A T C T A G C A T G

MEF2B/MA0660.1/Jaspar

Match Rank:9
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:WKCMMMTTWWAGG
-GCTATTTATAGC
 G C A T A C G T A G T C G T A C T G A C G T A C A G C T A C G T C G A T C G T A C G T A A C T G A C T G
A C G T C A T G A G T C C A G T C G T A C G A T C G A T G C A T C G T A C G A T C T G A C A T G G A T C

PB0048.1_Nkx3-1_1/Jaspar

Match Rank:10
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---WKCMMMTTWWAGG-
CTTAACCACTTAAGGAT
 A C G T A C G T A C G T G C A T A C G T A G T C G T A C T G A C G T A C A G C T A C G T C G A T C G T A C G T A A C T G A C T G A C G T
G T A C G C A T C G A T T C G A C T G A T A G C A G T C C G T A G T A C A C G T A G C T C G T A C G T A T A C G A C T G T C G A A C G T