Information for 17-AGCGGACCAA (Motif 21)

C G T A A C T G A G T C A C T G A C T G C G T A A G T C A G T C C G T A C G T A
Reverse Opposite:
A C G T A C G T A C T G A C T G A C G T A G T C A G T C A C T G A G T C A C G T
p-value:1e-6
log p-value:-1.606e+01
Information Content per bp:1.530
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.42%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets58.5 +/- 19.3bp
Average Position of motif in Background77.4 +/- 6.0bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HINFP/MA0131.2/Jaspar

Match Rank:1
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-AGCGGACCAA-
NCGCGGACGTTG
 A C G T C G T A A C T G A G T C A C T G A C T G C G T A A G T C A G T C C G T A C G T A A C G T
T G A C G T A C T A C G T A G C C T A G A T C G C G T A T A G C T A C G A G C T A C G T T A C G

NFYB/MA0502.1/Jaspar

Match Rank:2
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-AGCGGACCAA----
AAATGGACCAATCAG
 A C G T C G T A A C T G A G T C A C T G A C T G C G T A A G T C A G T C C G T A C G T A A C G T A C G T A C G T A C G T
T C G A G T C A G T C A A G C T A T C G T C A G C T G A A G T C A G T C C G T A C T G A A C G T T A G C T C G A T A C G

POL013.1_MED-1/Jaspar

Match Rank:3
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:AGCGGACCAA
--CGGAGC--
 C G T A A C T G A G T C A C T G A C T G C G T A A G T C A G T C C G T A C G T A
A C G T A C G T A T G C A C T G A C T G C G T A A C T G A G T C A C G T A C G T

NFYA/MA0060.2/Jaspar

Match Rank:4
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:AGCGGACCAA----------
--TGGACCAATCAGCACTCT
 C G T A A C T G A G T C A C T G A C T G C G T A A G T C A G T C C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A G C T A T C G T C A G C T G A A T G C A G T C C G T A T C G A G A C T T A G C T C G A T C A G T G A C C T G A A T G C A C G T G T A C C G A T

PH0126.1_Obox6/Jaspar

Match Rank:5
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---AGCGGACCAA--
AAAAACGGATTATTG
 A C G T A C G T A C G T C G T A A C T G A G T C A C T G A C T G C G T A A G T C A G T C C G T A C G T A A C G T A C G T
G T C A G C T A C T G A G C T A C T A G T A G C C T A G A C T G G T C A A C G T G A C T C G T A C G A T G A C T A T C G

POL010.1_DCE_S_III/Jaspar

Match Rank:6
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-AGCGGACCAA
CAGCC------
 A C G T C G T A A C T G A G T C A C T G A C T G C G T A A G T C A G T C C G T A C G T A
T A G C C G T A A C T G A G T C A T G C A C G T A C G T A C G T A C G T A C G T A C G T

SPIB/MA0081.1/Jaspar

Match Rank:7
Score:0.54
Offset:0
Orientation:forward strand
Alignment:AGCGGACCAA
AGAGGAA---
 C G T A A C T G A G T C A C T G A C T G C G T A A G T C A G T C C G T A C G T A
C G T A T A C G T G C A C T A G C A T G C G T A C G T A A C G T A C G T A C G T

PB0173.1_Sox21_2/Jaspar

Match Rank:8
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-AGCGGACCAA------
NNNNNGAACAATTGANN
 A C G T C G T A A C T G A G T C A C T G A C T G C G T A A G T C A G T C C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A G C T G T C A C T A G G T A C A C T G T A C G T C G A C G T A A T G C C G T A T C G A G C A T C G A T T A C G T C G A A G C T A C G T

NFY(CCAAT)/Promoter/Homer

Match Rank:9
Score:0.53
Offset:4
Orientation:forward strand
Alignment:AGCGGACCAA----
----AGCCAATCGG
 C G T A A C T G A G T C A C T G A C T G C G T A A G T C A G T C C G T A C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T C G A C T A G A G T C A G T C C G T A C G T A A C G T T A G C T C A G T A C G

PB0196.1_Zbtb7b_2/Jaspar

Match Rank:10
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-AGCGGACCAA------
CATAAGACCACCATTAC
 A C G T C G T A A C T G A G T C A C T G A C T G C G T A A G T C A G T C C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A G T C C G A T C A G T C T G A T G C A A C T G G T C A G A T C A T G C G T C A G A T C G A T C G C T A A C G T C A G T C T G A A G C T