Information for 14-GACTGACAGGAGC (Motif 17)

A C T G G T C A A T G C A C G T A C T G G C T A G T A C C G T A C T A G A C T G G T C A A T C G T G A C
Reverse Opposite:
A C T G A T G C A C G T A G T C A G T C A C G T A C T G C A G T G T A C T C G A T A C G A C G T A G T C
p-value:1e-8
log p-value:-1.950e+01
Information Content per bp:1.774
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.84%
Number of Background Sequences with motif18.0
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets40.4 +/- 32.1bp
Average Position of motif in Background52.3 +/- 19.1bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:1
Score:0.71
Offset:-1
Orientation:reverse strand
Alignment:-GACTGACAGGAGC
TGAGTGACAGSC--
 A C G T A C T G G T C A A T G C A C G T A C T G G C T A G T A C C G T A C T A G A C T G G T C A A T C G T G A C
C G A T A T C G T C G A A C T G C G A T A T C G C T G A A G T C C G T A A T C G T A C G G A T C A C G T A C G T

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:2
Score:0.70
Offset:-2
Orientation:reverse strand
Alignment:--GACTGACAGGAGC
NTGATTGACAGN---
 A C G T A C G T A C T G G T C A A T G C A C G T A C T G G C T A G T A C C G T A C T A G A C T G G T C A A T C G T G A C
A C G T C G A T A T C G C G T A A C G T C A G T A C T G C T G A A G T C C T G A A T C G A T C G A C G T A C G T A C G T

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:3
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--GACTGACAGGAGC
BTGABTGACAGS---
 A C G T A C G T A C T G G T C A A T G C A C G T A C T G G C T A G T A C C G T A C T A G A C T G G T C A A T C G T G A C
A C G T C G A T A C T G C G T A A C G T A C G T A C T G C T G A A G T C C T G A T A C G A T G C A C G T A C G T A C G T

MEIS2/MA0774.1/Jaspar

Match Rank:4
Score:0.67
Offset:2
Orientation:forward strand
Alignment:GACTGACAGGAGC
--TTGACAGC---
 A C T G G T C A A T G C A C G T A C T G G C T A G T A C C G T A C T A G A C T G G T C A A T C G T G A C
A C G T A C G T C G A T C A G T A C T G C G T A G T A C T G C A T A C G T A G C A C G T A C G T A C G T

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:5
Score:0.67
Offset:0
Orientation:forward strand
Alignment:GACTGACAGGAGC
VGCTGWCAVB---
 A C T G G T C A A T G C A C G T A C T G G C T A G T A C C G T A C T A G A C T G G T C A A T C G T G A C
T C A G T A C G T A G C A C G T A C T G C G A T A G T C C G T A T A C G A G T C A C G T A C G T A C G T

PH0141.1_Pknox2/Jaspar

Match Rank:6
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-GACTGACAGGAGC--
NNATTGACAGGTGCTT
 A C G T A C T G G T C A A T G C A C G T A C T G G C T A G T A C C G T A C T A G A C T G G T C A A T C G T G A C A C G T A C G T
T C G A C A G T C G T A C A G T A G C T C T A G C G T A A G T C C T G A C A T G A T C G A G C T T A C G A G T C G A C T C G A T

MEIS3/MA0775.1/Jaspar

Match Rank:7
Score:0.64
Offset:2
Orientation:forward strand
Alignment:GACTGACAGGAGC
--TTGACAGG---
 A C T G G T C A A T G C A C G T A C T G G C T A G T A C C G T A C T A G A C T G G T C A A T C G T G A C
A C G T A C G T C G A T G C A T A T C G C T G A G A T C C T G A A C T G A T C G A C G T A C G T A C G T

MEIS1/MA0498.2/Jaspar

Match Rank:8
Score:0.63
Offset:2
Orientation:forward strand
Alignment:GACTGACAGGAGC
--TTGACAG----
 A C T G G T C A A T G C A C G T A C T G G C T A G T A C C G T A C T A G A C T G G T C A A T C G T G A C
A C G T A C G T G C A T G C A T A T C G T G C A A G T C C T G A C T A G A C G T A C G T A C G T A C G T

Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer

Match Rank:9
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:GACTGACAGGAGC
-RHTGWCAR----
 A C T G G T C A A T G C A C G T A C T G G C T A G T A C C G T A C T A G A C T G G T C A A T C G T G A C
A C G T C T A G G T A C A G C T C T A G G C T A G A T C C G T A C T G A A C G T A C G T A C G T A C G T

ID4/MA0824.1/Jaspar

Match Rank:10
Score:0.62
Offset:4
Orientation:reverse strand
Alignment:GACTGACAGGAGC-
----GACAGGTGTN
 A C T G G T C A A T G C A C G T A C T G G C T A G T A C C G T A C T A G A C T G G T C A A T C G T G A C A C G T
A C G T A C G T A C G T A C G T C T A G T C G A A G T C C G T A A T C G A T C G A G C T A C T G A G C T G T C A