Information for 13-TGCGAAGATG (Motif 13)

A G C T A C T G A G T C A C T G C T G A T G C A A C T G C T G A A C G T A C T G
Reverse Opposite:
A G T C G T C A A G C T A G T C A C G T A G C T G T A C A C T G A G T C T C G A
p-value:1e-9
log p-value:-2.092e+01
Information Content per bp:1.857
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.16%
Number of Background Sequences with motif39.2
Percentage of Background Sequences with motif0.08%
Average Position of motif in Targets58.2 +/- 24.0bp
Average Position of motif in Background46.0 +/- 30.4bp
Strand Bias (log2 ratio + to - strand density)1.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFIA/MA0670.1/Jaspar

Match Rank:1
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--TGCGAAGATG
GGTGCCAAGT--
 A C G T A C G T A G C T A C T G A G T C A C T G C T G A T G C A A C T G C T G A A C G T A C T G
T C A G C A T G A C G T A C T G A G T C A G T C C G T A C G T A T C A G C G A T A C G T A C G T

POL008.1_DCE_S_I/Jaspar

Match Rank:2
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:TGCGAAGATG
--NGAAGC--
 A G C T A C T G A G T C A C T G C T G A T G C A A C T G C T G A A C G T A C T G
A C G T A C G T T A C G T A C G T G C A T C G A T A C G T G A C A C G T A C G T

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:3
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-TGCGAAGATG
TTGCCAAG---
 A C G T A G C T A C T G A G T C A C T G C T G A T G C A A C T G C T G A A C G T A C T G
A G C T A C G T A C T G A T G C A G T C C G T A C T G A T A C G A C G T A C G T A C G T

PB0055.1_Rfx4_1/Jaspar

Match Rank:4
Score:0.55
Offset:-5
Orientation:reverse strand
Alignment:-----TGCGAAGATG
NNCGTTGCTATGGNN
 A C G T A C G T A C G T A C G T A C G T A G C T A C T G A G T C A C T G C T G A T G C A A C T G C T G A A C G T A C T G
G C T A A G T C A T G C C T A G A G C T G A C T C T A G A G T C A G C T C T G A C A G T T A C G A T C G C A G T T C G A

YY1/MA0095.2/Jaspar

Match Rank:5
Score:0.55
Offset:3
Orientation:forward strand
Alignment:TGCGAAGATG-----
---CAAGATGGCGGC
 A G C T A C T G A G T C A C T G C T G A T G C A A C T G C T G A A C G T A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T G A C C T G A T C G A T C A G C G T A A G C T C T A G C T A G G T A C A C T G T C A G G T A C

Tbr1(T-box)/Cortex-Tbr1-ChIP-Seq(GSE71384)/Homer

Match Rank:6
Score:0.55
Offset:-4
Orientation:forward strand
Alignment:----TGCGAAGATG
AAGGTGTKAA----
 A C G T A C G T A C G T A C G T A G C T A C T G A G T C A C T G C T G A T G C A A C T G C T G A A C G T A C T G
C T G A C T G A C A T G A T C G A G C T A T C G G A C T C A T G C T G A G T C A A C G T A C G T A C G T A C G T

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:7
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--TGCGAAGATG
CSTGGGAAAD--
 A C G T A C G T A G C T A C T G A G T C A C T G C T G A T G C A A C T G C T G A A C G T A C T G
A G T C T A C G C G A T A C T G C T A G A C T G C G T A C T G A G T C A C T G A A C G T A C G T

POL005.1_DPE/Jaspar

Match Rank:8
Score:0.54
Offset:3
Orientation:forward strand
Alignment:TGCGAAGATG--
---GAAGATGTT
 A G C T A C T G A G T C A C T G C T G A T G C A A C T G C T G A A C G T A C T G A C G T A C G T
A C G T A C G T A C G T T C A G G T C A C T G A A T C G G C T A G A C T T A C G G A C T G A C T

NFIX/MA0671.1/Jaspar

Match Rank:9
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--TGCGAAGATG
CGTGCCAAG---
 A C G T A C G T A G C T A C T G A G T C A C T G C T G A T G C A A C T G C T G A A C G T A C T G
T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G A C G T A C G T A C G T

Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer

Match Rank:10
Score:0.53
Offset:0
Orientation:forward strand
Alignment:TGCGAAGATG
TGCGTGGGYG
 A G C T A C T G A G T C A C T G C T G A T G C A A C T G C T G A A C G T A C T G
C A G T T C A G G A T C A C T G A C G T C T A G A C T G A C T G G A C T C T A G